Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1006 ATGAGGGAAGACGACTCAAATTGGTTCTCGCGATGGGAAGAGCAACTCCCTGCTCCACACGAACTCATGCCCCTCTCCCAGACCCTAATCACTCCCGATCTTGCTATGGCTTTCGATATCCGAAATCCTCAGCTCAATACCTCACAACAAATCCCTCAGCCCCCTCCTCCGTCAAATCCTCTGCCCTCTCCTGGGAATCCTACTCACCCTAACTCCGCGGACTTCGCTGATTCCGCTGAATTGGGTTCTGGTATTGGAGGCGACGAACCTGCTCGTACCCTCAAGCGTCCTCGCCTTGTTTGGACTCCTCAACTTCACAAGAGGTTTGTGGATGCTGTGGCACACTTGGGTATAAAGAATGCTGTGCCCAAGACTATAATGCAGTTGATGAGTGTGGATGGGTTGACTAGAGAAAACGTGGCTAGCCACTTGCAGAAATACCGGCTTTATCTCAAGCGCATGCAAGGATTATCCGGTGGCGGCGGCGGTAGCGGTGGCGGAGGAGGAGGAGGAGGTCCATTGGCTGCTTCCGCAGATCCTGCCACTGACCATTTGTTTGCTAGCTCGCCCGTGCCTCCCCATTTCTTGCATCCAACAAGACCTAATTCCGACCATTTCTTGCCGTTTGTGCCGGTCCAGACTCTGCAGCACCACCACCATCACCAGCAGCACATGGCGGCGGCGGCGGCGGCGGCGGCGGCCGTCCATCCACAGTTGCAGCCACAGTATCACAGACAGGTGGGGCATTTTGGGTCACCACCAAATGGGCACTTTGAGCATCCCTTTCTAACAAGGCAGCCTCAGGCTCAACCACTTCACAGGATGGGAGCTCCAATGCACAATCCAGTGGCTGCTAATTATGTGGAGGACATGGAATCGGCCAACGCGGCAGGGGCGAGAAAGGTTCTTACTCTATTTCCTACTGGGGATGATTGA 936 0.5481 MREDDSNWFSRWEEQLPAPHELMPLSQTLITPDLAMAFDIRNPQLNTSQQIPQPPPPSNPLPSPGNPTHPNSADFADSAELGSGIGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGSGGGGGGGGPLAASADPATDHLFASSPVPPHFLHPTRPNSDHFLPFVPVQTLQHHHHHQQHMAAAAAAAAAVHPQLQPQYHRQVGHFGSPPNGHFEHPFLTRQPQAQPLHRMGAPMHNPVAANYVEDMESANAAGARKVLTLFPTGDD 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1006 311 SUPERFAMILY Homeodomain-like 93 153 IPR009057 -
Alju01g1006 311 MobiDBLite consensus disorder prediction 46 91 - -
Alju01g1006 311 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 272 IPR044841 GO:0003700|GO:0006355
Alju01g1006 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Alju01g1006 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 152 IPR017930 -
Alju01g1006 311 MobiDBLite consensus disorder prediction 49 67 - -
Alju01g1006 311 Gene3D - 93 155 - -
Alju01g1006 311 FunFam Two-component response regulator 92 155 - -
Alju01g1006 311 Pfam Myb-like DNA-binding domain 100 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1006 Alju-ChrAlju01 7513840 7514775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1006 1 311 G2-like Transcription Factor Family AT3G10760 60.623 4.52e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju01g1006 Myb_DNA-binding 2.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1006 01 7513840 7514775 Alju01g1006 01 7513840 7514775 ECH