Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1003 ATGACTGAGTCAACTCCATCCTCAGATCTGTGTTTCAGTGATTTATCATCCGAGTTTGATAACCTCCCAGCCCCTTCCATGGATCCCCTCTTTTTCTCCGACAACAATCATGCCCTGCCCTCTGCAGCATTTGCATCGGACCTTGATTTAACCATGGAATTTGGGGACGATGGTGATTTTCAGATTTCCTTCGACGATCTCTATAATCCTCTAGAAGCCGATGATTTCCTACTACCCAATGACTATGTCCAATCGCCTGCATTGCATGACATCGAATTGAATGTCAATGATAAGCAGTTGAGCTACAACAGCACCGATTTTAAGTCGCCCGCCTCCGACACTTCAGGTTCGGGCTTTCAAATTTCTGATGTTGCAGATTTTCTGAATTCACAATCACCTGAGTCCAGTAGTTTCACGCAGAAGTTTTCTGTCACACAATCGGCTGCTAACTCAGGTGATCAGGACTCGTACCATTCACTGGATGGCAAGGTTTCAAGCTTTAAATTGCCAGATTCTGATTCTTGCGATCGGGACTCTTCTGGTGGTCCCGTTTCATCTCAGGGTTCAGGCAACGGTGTGGTGATGAATTCACCTTCACCGAGTTCTGACTGTGACGACAGAGACATTACTTCTCGTGGAATTGCTGGTCAGAATATAAAATTGGAGGAAATGGGTAAAAGTTGTGATCTGAAAAGGAAGAAGCAGCACAACCAAGGAAATACTGAGGCGAGAATGACCAAGTTCCGAAAGTCATCGATGCCTATGGAGAATGCCACTGAGCAGTCTGATCTCAACGACGTCAACGAAGAGGAGGACGAGAAAAGGAAGGCTAGGCTGTTGAGGAACCGGGAAAGTGCCCAGCTCTCCAGACAGAGAAAGAAGCATTATGTGGAGGAGCTTGAGGAAAAGGTGAGGTCAATGCATTCTACCATAACTGAGTTGAGTAGTAAGGTATCGTTTGTTATGGCCGAGAATGCTACTTTGAGACAGCAATTGAGTGCTAGTGGAATGTGCCATCCGCCAGCTCCAGGGATGTACCCGCATCCCCCTGTGGCACCAATGCCTTATCCATGGATGCCGTATGCACCCTATGCAGTCAAGCCGAATGGTTCTCAGGTTCCTGTGGTTCCAATTCCCAGGTTAAAGTCTCAACAACCACAATCTGCTCCAAGGGCCAAAAAGTCCGAGAATAAGAAGTCCGAGGGAAGAACTAAGAAGGTTGCCAGCATTAGTTTCCTGGGTTTATTTTTCTTCATATTTCTTTTTGGTGGGCTTGTTCCTCTAGTCAATTTTAATTTTGGAGGTTTAGGGGGCAATATTCCTGGTAGGCCCATCTCTATTACTGATAGTTTATATAGTCAACGCGGAGGAAAAGTTTGGGAGGTAATTGGTTATAGGAATGGATCTGAAGGAACACATAAACAGCGGGATTCACCATATAGAACAGCCTCAGATGGCTTTATTCATAAGGGCAATGCTACTGAACCCGAGCCTCTTCTTGCCTCTCTGTATGTTCCAAGGAATGATAAGCTCGTGAAGATTGACGGGAACTTGATAATACATTCTGTTTTGGCTACTGAGAAAGCGAAGGCATCTCAAACTGCTCATTCAGAGAATAATAGCAGAGAAACTGGATTGGCGATTTCTAAAGATTGGGATTCTGCTCTGGCTATTCCTGAAGTCGGAAGAAACAGAGATTCACATCCTCACTTGTATAGGAGTTCACCTGAACAGCGGAAGGCTCTGGCCTCTGGTTCAGCTGAAACATTGAAGGACCATCTAAAGTCAACTGCGACTGATGGTAAGATGCATAAGTGGTTCCACGAAGGCCTTGCTGGGCCAATGCTAAGTTCTGGGATGTGCTCAGAGGTTTTCCAGTTTGATGCCTCACCAACACCTGGAGCTATAGTTCCGGCATCGTCAGTTGCCAATGTTTCTGCAGTTAACCATGATACTAGCATCAACAAGAGCAGGAATAGAAGATTCCTCGATAGGCCTCCCCATTCCCTAGTGAGATCGAGTCTCAACGCCAGTGAAGAACATGCAAGAAATTCCCAGAATGAGGACCTCCACCGTAATAAATCAACATCTTCTATGGTGGTTTCAGTTCTCGTTGATCCCAAGGAGGTGGGAGATGGTGATGTGGATGGCATAATGCAACACAAATCACTTTCTCGGATTTTTGTGGTTGTTCTTATAGACAGCGTCAAGTATGTGACTTACTCGTGTGGTCTCCCACGCACATCTCCCCATCTTGTGACTGCGTGA 2268 0.4586 MTESTPSSDLCFSDLSSEFDNLPAPSMDPLFFSDNNHALPSAAFASDLDLTMEFGDDGDFQISFDDLYNPLEADDFLLPNDYVQSPALHDIELNVNDKQLSYNSTDFKSPASDTSGSGFQISDVADFLNSQSPESSSFTQKFSVTQSAANSGDQDSYHSLDGKVSSFKLPDSDSCDRDSSGGPVSSQGSGNGVVMNSPSPSSDCDDRDITSRGIAGQNIKLEEMGKSCDLKRKKQHNQGNTEARMTKFRKSSMPMENATEQSDLNDVNEEEDEKRKARLLRNRESAQLSRQRKKHYVEELEEKVRSMHSTITELSSKVSFVMAENATLRQQLSASGMCHPPAPGMYPHPPVAPMPYPWMPYAPYAVKPNGSQVPVVPIPRLKSQQPQSAPRAKKSENKKSEGRTKKVASISFLGLFFFIFLFGGLVPLVNFNFGGLGGNIPGRPISITDSLYSQRGGKVWEVIGYRNGSEGTHKQRDSPYRTASDGFIHKGNATEPEPLLASLYVPRNDKLVKIDGNLIIHSVLATEKAKASQTAHSENNSRETGLAISKDWDSALAIPEVGRNRDSHPHLYRSSPEQRKALASGSAETLKDHLKSTATDGKMHKWFHEGLAGPMLSSGMCSEVFQFDASPTPGAIVPASSVANVSAVNHDTSINKSRNRRFLDRPPHSLVRSSLNASEEHARNSQNEDLHRNKSTSSMVVSVLVDPKEVGDGDVDGIMQHKSLSRIFVVVLIDSVKYVTYSCGLPRTSPHLVTA 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1003 755 SUPERFAMILY Leucine zipper domain 274 332 IPR046347 GO:0003700|GO:0006355
Alju01g1003 755 MobiDBLite consensus disorder prediction 178 204 - -
Alju01g1003 755 Coils Coil 267 287 - -
Alju01g1003 755 MobiDBLite consensus disorder prediction 268 291 - -
Alju01g1003 755 MobiDBLite consensus disorder prediction 381 403 - -
Alju01g1003 755 FunFam bZIP transcription factor 49 273 335 - -
Alju01g1003 755 SMART brlzneu 270 334 IPR004827 GO:0003700|GO:0006355
Alju01g1003 755 Pfam bZIP transcription factor 271 332 IPR004827 GO:0003700|GO:0006355
Alju01g1003 755 MobiDBLite consensus disorder prediction 251 291 - -
Alju01g1003 755 MobiDBLite consensus disorder prediction 563 590 - -
Alju01g1003 755 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 272 335 IPR004827 GO:0003700|GO:0006355
Alju01g1003 755 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 56 752 - -
Alju01g1003 755 MobiDBLite consensus disorder prediction 149 220 - -
Alju01g1003 755 MobiDBLite consensus disorder prediction 672 696 - -
Alju01g1003 755 Coils Coil 297 317 - -
Alju01g1003 755 Gene3D - 272 339 - -
Alju01g1003 755 CDD bZIP_HY5-like 275 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1003 Alju-ChrAlju01 7490417 7493695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1003 17 754 bZIP Transcription Factor Family AT2G40950 46.597 7.11e-166 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju01g1003 bZIP_1 1.2e-10 CL0018