Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0998 ATGGGTTTAGAGATTATGGTGCCCAACACCTGCATTAGGGGTTGTTGTACCAGTTCTTCTATTCCTCTCCATGTTCTTCCTTCCTCTTATTCTCTTCTATCTCCAATTGCCAAAGGGGCGGAGAGTGTTGTTTACGAAGGAACCTTAGATGGTAACAAGGTTGCTGTCAAGAAACCTATCCTGTCAACTACAGAAGATATTAACAAGTTCCACAAAGAATTACAGCTGTTATGCAAGTTAGATCACCCGGGGATAGCAACACTGATTGCTGCCCATGCAAAGCCTCCCAATTACCTCTTTTTCTTCAAATTCTATGAATCTCTCAACCTTGCACAAAGGTTACACTTGGAAGAATGGACCCCGAGTATCAATTACGCACTTATGATAATAATTCAGTTAGCCAAAGCTTTGCAGTATCTTCATAACCTCGGGATATTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACGAAAATCTTTATCCACACCTCACTGATTTTGGTTTGGCAGAATACAAGAATGACCTTAAGAGTGTTTCTCTTGAAAATTGGAAATCTTCTGGCAAGCCTACTGGTGGTTTCCATAAAAAAAATATGGTCGGAACTCTAATATACATGGCACCTGAAATATTAAGGAAGGAGTTGCACACAGAAAAATCAGATGTCTACAGTTTTGGGGTGACAATCAATGAACTCCTTACAGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTACTGGAGATGAACTATACAGAGCAGCAACTAACAGCAGCTGTTGTTTCTGATGGATTAAGGCCGGTCCTTGCTGCTCAGGAGTCGGGTGTACCTTCAAGATTATTAGAATTAATACAGAGGTGCTGGGATGCAAAACCTGAAAATAGACCTTCCTTTGGTGATATAATTAAGGAGCTTGATTCCATCATTGAGCACGGAAGGGACGTTGATGATAAACATCTCAGAACTTCTAAATTGCATGATAATCAGGTTGTAGATCGGAGCAATAATCACCTTCAGGCTTATCAAGAGAGTATTAACTGGTCTAATCTGGGAGAACTTTTCTCAAAGAGATCCTCCAGTGCAACTGATTCTAAATTGAGAACCTGGAATAGGTCTTTTGATGAGCCTTTGGCTCACTGTCCAACACTTTCATGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACCATGGAGGACACACATTTCATTCTTCCCAGCATATGCAATGAAAAGGACATACATGCTTTTGGCATCTTTGATGGTCATAGAGGTGCAGCAGCTGCTGAGTTTTCTGCTAAAGCCATGCCAGGGTTCCTGCAGTCTTTAGGTTCTATAGGAAGTCCAGCTACCACACTCGTTGAGGCATTCCTTAAAACAGATGCTGTCTTCAGAGAAGAGCTCGATTCCTGTCGTAAATCCAGAAGAGTTACCCAGAAGGATTGGCATCCTGGTTGTACAGCGGTCGCTGCTCTTGTAGTCAGAAACAAGCTTTTTGTTGCTAACAGTGGTGATTGCAGGACAATCTTATGCCGGGCTGGTTCTCCCATTGCTCTAACCAAAGATCATGTTGCAAGCTGTCCTGAAGAGAGAGAACGTGTTATTCGTGATGGAGGACAAGTTCACTGGCAAGTTGATACTTGGAGGGTTGGCCTTCCTGCACTTCAGGTTACTCGTTCCATTGGGGATGACGACCTGAAGCCGGCTGTAACTGCAGAACCGGAGATAACTGAAACTACTTTATCTGCAGACGATGAATATCTGGTGTTGGCAAGTGATGGGCTGTGGGATGTGATGAGCAATAAAGAAGTGATAAGCATAATCAAGGATACAGTGAAAGAGGCAGGAATGTGCTCAAAGAGGTTGGCTACTGAGGCAGTGGAACGAGGTAGCAAAGATAACATTACGGTCATTGTGGTTTTCTTGCGCCCTGTCTCTACAGCAGAGAGAATTTATTAG 1974 0.4316 MGLEIMVPNTCIRGCCTSSSIPLHVLPSSYSLLSPIAKGAESVVYEGTLDGNKVAVKKPILSTTEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYLFFFKFYESLNLAQRLHLEEWTPSINYALMIIIQLAKALQYLHNLGILHRDVKPANILLDENLYPHLTDFGLAEYKNDLKSVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVTINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAQESGVPSRLLELIQRCWDAKPENRPSFGDIIKELDSIIEHGRDVDDKHLRTSKLHDNQVVDRSNNHLQAYQESINWSNLGELFSKRSSSATDSKLRTWNRSFDEPLAHCPTLSWGSYATCGRRETMEDTHFILPSICNEKDIHAFGIFDGHRGAAAAEFSAKAMPGFLQSLGSIGSPATTLVEAFLKTDAVFREELDSCRKSRRVTQKDWHPGCTAVAALVVRNKLFVANSGDCRTILCRAGSPIALTKDHVASCPEERERVIRDGGQVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITETTLSADDEYLVLASDGLWDVMSNKEVISIIKDTVKEAGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0998 657 SMART PP2C_SIG_2 405 647 IPR001932 -
Alju01g0998 657 CDD PP2Cc 392 647 IPR001932 -
Alju01g0998 657 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 382 651 - -
Alju01g0998 657 Gene3D Transferase(Phosphotransferase) domain 1 19 347 - -
Alju01g0998 657 SMART PP2C_4 380 645 IPR001932 -
Alju01g0998 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Alju01g0998 657 Gene3D - 384 652 IPR036457 -
Alju01g0998 657 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 28 317 - -
Alju01g0998 657 FunFam Protein kinase and PP2C-like domain-containing protein 20 348 - -
Alju01g0998 657 SMART serkin_6 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0998 657 SUPERFAMILY Protein kinase-like (PK-like) 22 325 IPR011009 -
Alju01g0998 657 Pfam Protein phosphatase 2C 395 640 IPR001932 -
Alju01g0998 657 Pfam Protein kinase domain 31 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0998 657 ProSiteProfiles PPM-type phosphatase domain profile. 390 647 IPR001932 -
Alju01g0998 657 ProSiteProfiles Protein kinase domain profile. 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0998 657 SUPERFAMILY PP2C-like 382 649 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0998 Alju-ChrAlju01 7441179 7446099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0998 99 657 PP2C-type Phosphatase Gene Family AT2G40860 65.597 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Alju01g0998 Pkinase 1.5e-45 CL0016