Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0986 ATGAGCATTTATACGGAAGCGACAAAACCTTGCTCTACCTGTTCCCCTCTGCATTCATCTACCTCATTGTTCCGATTCAATTGGGAGATCAAGGTACGGCTTTGCAACCTCAATTTACTCAGTATAGATTGTCCAATCAGGGGTATGCTGGCCACCATTGTCAGGGCTAACTCTCAGAATTTCCTTCCCGTCATAAAGGCATCTGGTGATCAGATATCATCTCTCATATGCATGATTCCTTATTGGAACATAACGGGCCATTCCACAGAACGGGCAATTTTTCTTTCTTTCTTTCTTCTTTTGGATAGGAGAGATCGGAATAATTGTCATTCAACTACAATGGCGTCTGATCCGTGGGTTAGACAATATAATGAAGCATCAAAACTGGCGGAAGAAGTCAAGGGAATGATTTCTGCTAAGAGTGGGCTTCCCCCTTCTGGACCTGAAACACAGCGTCATCTATCAGCAGCCCGAAGAAAAGTGACCATACTGAGGACTAAAGTTGAAATTCTGCAGTCACTTCTCACAACGCTGCCTGGCAAGCAACCAAAGTCAGGAAAGGAAATGCATCGACGCCAAGACTTAATTGCTAATTTAAGCTCCAAAGCCAATGAGATGGCTGCTACCCTTAACATGTCTGGTCTTGCTAATAGAGATAGCTTGCTAGGCCCTGATAGAAAGTCGGAAGAAGTCATGAAGAAGGCAGCTAGCTTGGACAACCAAGGCCTTGTTGGTTTTCAACGGCAAATTATTAAAGAACAAGATGATGATCTTGAAAAATTGGAAGAGACTGTTACAAGCACCAAACACATTGCATTGGCGGTTAATGAGGAACTTAGCCTACATACTAGGCTTCTGGATGATTTGAATGAGCATGTGGATGCAACCAATTCCCGCCTACAGATGGTACAAAGGAGGTTGGCCTTCTTGAGCCGGCGCACTAAAGGCGGTTGCTCTTGCATGATCCTGTTAGTCCTTGTTATCATAATTATGATAATTGTTGCGTGGGCATTGCTTTTGGTTGTTATGAACTATTCAAGTTACCGTGCCAGCAAGGGGGAAAGCTCATGTATTTCTGCTTTTATATACATTAGTCTGACTGGAGTCTGCACTCGTAGACGCTCCTCTCTCGCCCTAACTTCGGAGCTTAGGCGCAACTGGGCCGCCATTGTGTCTGTGATCATACTGGCCGCATGTCTGGACCAGTGCTATTGTAGCTGGATATGCTGA 1230 0.4472 MSIYTEATKPCSTCSPLHSSTSLFRFNWEIKVRLCNLNLLSIDCPIRGMLATIVRANSQNFLPVIKASGDQISSLICMIPYWNITGHSTERAIFLSFFLLLDRRDRNNCHSTTMASDPWVRQYNEASKLAEEVKGMISAKSGLPPSGPETQRHLSAARRKVTILRTKVEILQSLLTTLPGKQPKSGKEMHRRQDLIANLSSKANEMAATLNMSGLANRDSLLGPDRKSEEVMKKAASLDNQGLVGFQRQIIKEQDDDLEKLEETVTSTKHIALAVNEELSLHTRLLDDLNEHVDATNSRLQMVQRRLAFLSRRTKGGCSCMILLVLVIIIMIIVAWALLLVVMNYSSYRASKGESSCISAFIYISLTGVCTRRRSSLALTSELRRNWAAIVSVIILAACLDQCYCSWIC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0986 409 Coils Coil 286 306 - -
Alju01g0986 409 PANTHER SYNTAXIN 135 330 IPR045242 -
Alju01g0986 409 SUPERFAMILY SNARE fusion complex 239 309 - -
Alju01g0986 409 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 248 310 IPR000727 -
Alju01g0986 409 Coils Coil 251 271 - -
Alju01g0986 409 FunFam syntaxin-51 isoform X2 250 312 - -
Alju01g0986 409 Gene3D - 250 312 - -
Alju01g0986 409 CDD SNARE_Qc 251 308 - -
Alju01g0986 409 Pfam SNARE domain 285 334 IPR000727 -
Alju01g0986 409 SMART tSNARE_6 243 310 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0986 Alju-ChrAlju01 7324060 7332657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0986 110 339 SNARE and Associated Proteins AT1G79590 54.741 3.99e-87 264