Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0980 ATGGAATTGGACCAAGACTCGATTCCGCCAGCACCTAGCTCATCAGCTGACGAGTCCATAGTTTTGAATAGGCTCTCTCATCCAAACCCACAAAACCAGATACTGAGAGCAGTTCCAACCAGTTCATTTAGAACACCATCTTCCACAAATGAATACAAGGGAAATCAAAGAGTCTCTGAGATGCATGGAGGTGAAAGAGAAGAAAGCAAGTCCCAGAAGAAGAAACAGAAGGGAAAGCAGGATGGTGGTTCTGCATCAGCTGATGTCAATGAAGACAAACTGGTTGATGATATTCTCAAATCAATCAATCCTTTGGATACACTAAATGAACCTAACAGTGGCAATAAGGACTCAGTTGCATATACACTTATGATATATGAAGTACTGAGAAGAAAGATATCACAAATTGAAGAGGCAAAAGAAGGGGATGTACTAGTCGTGAAGCGATCTGATTTAAGAGCAGGAAATGTTTTGTTGAGCAAAGGGATTCGGACTAATGAACAGAAACGCATTGGAACTGTCCCTGGCGTTGAAGTTGGAGACATTTTCTATTTCAGAATGGAATTGTGTGTGGTGGGATTGCATGCTCCATCCATGTCCGGAATTGATTACCTAGGTGTCAAAGTTAGTCAAGAGGAAGAACCACTGGCTATCAGTATTATATCATCTGGAGGATATGAAGATAATGTTGATGATGATGGGGATGTACTTTTTTACAGTGGCCAAGGTGGGTCTTGCCAAAGTAAAGAACAGTGTGATCAGAAGCTTGAAAGAGGGAATCTTGCATTAGAAAAAAGCCTCCATCGAGGTAATGAAGTAAGGGTCACAAGGGGTCTCAAGGACTCTACATGCTCTAGAGCAAAGGTTTATGTCTATGATGGTCTTTACAAGATCCAGGAATCTTGGGTGGAGAAAGGAACATCAGATTTCTATGTGTTCAAATATAAATTAGTGAGGCTTCCTGGGCAGCCTGAAGGATATATGATTTGGAAATCAATTAAGCAATGGACTGACAAGTCTACTTTGAGATCTGGGCTTATATTGCCTGATCTTACTTCTGGGGAAGAAAATTTACCTGTTTGTCTTGTAAATGATGTTGATGATGAGAAGGGTCCTGCATAATGGAGGCTATCTGCAAATGGGGTACTCATGGACCTGAAATCTGTGATGTATGAGTGTGGTCGTTATTGTCAGTGTCCTCCTAGTTGTCGAAACCGAGTTTCACAAGGTGGCTTGAAGATTCGTTTGGAGGTGTTCAAGACTAAGAATAAAGGGTGGGATCTAAGATCCTGGGATCCTATTCGTGCAGGAACTTTTATATGTGAGTATGCAGGAGAAGTCATAGACAGTGCTAGAGTTGAAGAGCTTGGTGGTGGTGAAAATGATGATGATGATGATTATATTTTTGACTCTACACGCAGTTATCAGCAACTGGAAATCTTTCCTAGTGATACTGAAGCACCTAAGATTCCATATTCACTCTATATAACTGCGAGGAATAGTGGAAATGTTGGTCGCTTCATGAACCATAGTTGCTCTCCAAATGTGTTCTGGCGTCCCATTACACGCACAAATACAGGCGGGAAACGAAAACCCGCCCATTCCCAACAACGCATTGTGGTGTGGGTTTTTGCGGAAGAATTGAGATCATTGCGCAATCACCACCATCTGGCCCGCAGCCGTCTGGGAATTTTTTCCGCCGTTATGAATAGCCTTAACAGCCACTCTCCCTCCGACCTTTTGGCCGTGGCTGTTGAACCTTCCAAGCCTAAACCCAGAAGGCTCTACCAAGTCTGGAAGGGAAACAATAAATTTCTATGTGGGGGACGGTTAATCTTTGGTCGGGATGCAAAGTCTCTTTTTCTAACAACATTCATGATTGGAGGTCCTGCACTGTTGTTCTGCATAAGAATGCTTTTAACTTTTAAAGATGATCCTCACTTTAGCCGTCCCGTACTGATTGGAGCATTGGTTCTCACATTTTTGGATTTTACTTTTTTGTCCTTGACTTGTTGTAGAGATCCAGGAATTATCCCCAGAAATTCACGCATACTTGAAGCAGATGAAGCACTTGACATAAACTCAGCATCCATGGAGTGGCTAAATTATAATTCCAACAGTGTGAAATTACCTCGAATGAAGGATGTGAAGATCAATGGCCATACAGTGAAAGTGAAGTTCTGTGATACTTGCTTGCTGTATCGTCCACCGCGGGCATCACATTGCTCTATCTGCAACAACTGTGTACAGAAGTTTGATCACCATTGCCCATGGGTTGGTCAGTGTATTGCAGCGCGAAACTATCCCTTCTTCGTTTTGTTCATATCATCAACAACCATGTTGTGTCTATATGTATTTGTGTTTTCCTGGATTAACATTGGTCGGAAAAGGGGCAAGTTTGGGCACAACATGGCACACGATGCTTTATCAGTTATTCTTATTGTATATTGCTTCATAGTCATCTGGTTTGTGGGCGGCCTTACAGTTTTCCATCTTTATTTGATCTCTACCAACCAGACAACTTATGAGAATTTCCGGTACCGCTATGACAAGAAGGAAAACCCATATAGACAGGGAATATTGAAGAACTTTTTAGAACTGTCCTTTTCAAAGATTCCACGTTCAGCGATCAATTTCAGAGCTTGGGTTACAGCTGATACAGAACATGAATCCGCTGCTTCAGATCTTGAAAGAGGCTTGATGAACTCAAAACAAAAATTTAACATGGACATGGGAACAAAGAATGACAAGGACGGTCAAAAGCGACTTCCCAGTATTTTACAAGATTTGGATTACAATGGCGTTGATAATTTGAAGAAGGCAAAAGAGGAAAAGGCACCATTTAACATTTTCGTGCCTGCCGATCAAGAATCAAAATATGCCCGATGGAATTCCAAAGTAGGAGTAGATGCTGAACATGATAAACCGACCGACCAATAG 2940 0.418 MELDQDSIPPAPSSSADESIVLNRLSHPNPQNQILRAVPTSSFRTPSSTNEYKGNQRVSEMHGGEREESKSQKKKQKGKQDGGSASADVNEDKLVDDILKSINPLDTLNEPNSGNKDSVAYTLMIYEVLRRKISQIEEAKEGDVLVVKRSDLRAGNVLLSKGIRTNEQKRIGTVPGVEVGDIFYFRMELCVVGLHAPSMSGIDYLGVKVSQEEEPLAISIISSGGYEDNVDDDGDVLFYSGQGGSCQSKEQCDQKLERGNLALEKSLHRGNEVRVTRGLKDSTCSRAKVYVYDGLYKIQESWVEKGTSDFYVFKYKLVRLPGQPEGYMIWKSIKQWTDKSTLRSGLILPDLTSGEENLPVCLVNDVDDEKGPAXWRLSANGVLMDLKSVMYECGRYCQCPPSCRNRVSQGGLKIRLEVFKTKNKGWDLRSWDPIRAGTFICEYAGEVIDSARVEELGGGENDDDDDYIFDSTRSYQQLEIFPSDTEAPKIPYSLYITARNSGNVGRFMNHSCSPNVFWRPITRTNTGGKRKPAHSQQRIVVWVFAEELRSLRNHHHLARSRLGIFSAVMNSLNSHSPSDLLAVAVEPSKPKPRRLYQVWKGNNKFLCGGRLIFGRDAKSLFLTTFMIGGPALLFCIRMLLTFKDDPHFSRPVLIGALVLTFLDFTFLSLTCCRDPGIIPRNSRILEADEALDINSASMEWLNYNSNSVKLPRMKDVKINGHTVKVKFCDTCLLYRPPRASHCSICNNCVQKFDHHCPWVGQCIAARNYPFFVLFISSTTMLCLYVFVFSWINIGRKRGKFGHNMAHDALSVILIVYCFIVIWFVGGLTVFHLYLISTNQTTYENFRYRYDKKENPYRQGILKNFLELSFSKIPRSAINFRAWVTADTEHESAASDLERGLMNSKQKFNMDMGTKNDKDGQKRLPSILQDLDYNGVDNLKKAKEEKAPFNIFVPADQESKYARWNSKVGVDAEHDKPTDQ 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0980 979 Pfam SET domain 425 521 IPR001214 GO:0005515
Alju01g0980 979 ProSiteProfiles YDG domain profile. 172 319 IPR003105 -
Alju01g0980 979 Gene3D SET domain 340 548 IPR046341 -
Alju01g0980 979 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 32 532 - -
Alju01g0980 979 SUPERFAMILY SET domain 335 526 IPR046341 -
Alju01g0980 979 SMART set_7 414 547 IPR001214 GO:0005515
Alju01g0980 979 SUPERFAMILY PUA domain-like 154 337 IPR015947 -
Alju01g0980 979 ProSiteProfiles SET domain profile. 414 567 IPR001214 GO:0005515
Alju01g0980 979 Pfam SAD/SRA domain 171 323 IPR003105 -
Alju01g0980 979 MobiDBLite consensus disorder prediction 58 81 - -
Alju01g0980 979 MobiDBLite consensus disorder prediction 1 90 - -
Alju01g0980 979 ProSiteProfiles DHHC domain profile. 726 776 - -
Alju01g0980 979 Gene3D - 155 339 IPR036987 -
Alju01g0980 979 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 35 625 IPR025794 GO:0016571
Alju01g0980 979 SMART G9a_1 167 323 IPR003105 -
Alju01g0980 979 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 155 338 - -
Alju01g0980 979 Pfam DHHC palmitoyltransferase 725 846 IPR001594 GO:0016409
Alju01g0980 979 MobiDBLite consensus disorder prediction 8 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0980 Alju-ChrAlju01 7272280 7285503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0980 38 525 Su(var)3-9 homologs AT5G04940 44.118 1.14e-140 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju01g0980 SAD_SRA 1.6e-48 CL0178