Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0978 ATGGGAAGGGCTCGGCTGCTTGTTTCAGATTTCCTCATGGCTTTCATGTGGGTTTGGTCAGGGGTTCTAATTAAGGTATTTGTCTTTAGATACTTGGGGTTGAGTCACCAGCCCCTTCTTGAGGTTCTGAGGGTGACGCTTTCCATTATAAACATGTTCTTTTTTGCATTGTTGGGAAATTGGACCCATGGAGGTGCCTACAATCCTCTCACAGTTTTAGCCGGTGCCATTTCTGGGGATTTCAGCTATTTCCTTTTCTGCGTTGGCGCTAGAATTCCCACTCAGGTATTTGGATCTATTACTGGGGTGAGGTTCATAATTGCCACAATTCCTGAAGTAGGACGGGGACCGCGTTTGAGCATTGACATTCATCGAGGTGCTTGGACAGAAGGATTGCTGACATTTGCAATTGTCATCATCTCGCTTGGGCTTGCCTTGAAACTACCTGGAAGTTTCTATAGGAAGACTTGGATTTCCAGCATTTCCAAGCTAACACTTAATATACTTGGCTCTGATCTAACTGGCGGTGTTATGAACCCAGCCTCTGTAATGGGGTGGGCTTACAATCGAGGGGATCACATTACCAAAGAGCACATCCTTGTATACTGGCTTGCCCCTGTAAAGGCAACTCTACTTGCAGTGTGGGTATTCAAATTGCTAGTTAAGTCTGCAACACAAGAGAAAACCAGCACAAAAACTAAATCAGATTGA 711 0.4501 MGRARLLVSDFLMAFMWVWSGVLIKVFVFRYLGLSHQPLLEVLRVTLSIINMFFFALLGNWTHGGAYNPLTVLAGAISGDFSYFLFCVGARIPTQVFGSITGVRFIIATIPEVGRGPRLSIDIHRGAWTEGLLTFAIVIISLGLALKLPGSFYRKTWISSISKLTLNILGSDLTGGVMNPASVMGWAYNRGDHITKEHILVYWLAPVKATLLAVWVFKLLVKSATQEKTSTKTKSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0978 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0978 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0978 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0978 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0978 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0978 236 SUPERFAMILY Aquaporin-like 4 224 IPR023271 -
Alju01g0978 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Alju01g0978 236 Gene3D Glycerol uptake facilitator protein. 3 236 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0978 Alju-ChrAlju01 7262784 7264517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0978 1 236 Major Intrinsic Protein MIP AT3G56950 59.072 9.61e-100 289