Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0942 ATGGAAGAATCTGCAAGAAAGCTGCTGAGTGAAGAAGATGATGATCTGCCTCTGATTAAAAGAGTATGGAAGGAGTGTAAAGTGATGTGGATAGTAGCAGCTCCAGCCATATTCACTCGAGCTTCCACCTTCGGCATCAATGTCACAAGCCAAGCTTTTGTTGGTCATATTGGCTCCAAAGAGCTCGCTGCCTTCGCTCTCGTCTTCACTGTTCTTATCAGATTCGCCAATGGTATTCTGTTCGGGATGGCCAGTGCATTATCCACTCTGTGTGGACAAGCGTATGGTGCCAGAAGATATGGCATGATGGGAGTGTATCTTCAACGATCATGGATAGTCTTATACTTAACTTGCTTCCTTCTTCTTCCCTTGTTCTTCTTCACTACCCCAATTATGAAGATGTTGGGCCAAGATGAAAGCATTGCTGATGTGGCAGGAACAATTTCTCTCTGGTCCATCGCTGTTATTTTTGCCTATGTCTTGTCATTCACCTTCCAGACATTCTTGCAATCTCAGAGCAAGAACGTTGTTATATCATTCTTGGCAGCTTTCTCCATCGCCATTCACATGTCTCTGTCGTGGCTTTTGACTATCAAGTACAAGCTTGGGATACCTGGTGCAATGATTTCAACAATTCTTGCTTATTGGATACCCAACATTGGCCAATTCATGTTTGTGACATGTGGTTGGTGTCCTGAAACGTGGAATGGCTTCTCCTTTTTGGCTTTTAAAGATCTTTGGCCTGTGGTCAAGCTCTCTCTTACATCGGGTGCCATGTTGTGTCTAGAGCTCTGGTATAACACAATATTGGTTCTATTAACTGGGAGCATGAAAAATGCAGAGGTTGAAATTGACGCTCTTTCTATATGCCTCAACATCAACGGATGGGAAATGATGATATCTTTTGGCTTTCTGGCTGCCGCTAGTGTGAGAGTGTCAAATGAGCTTGGGAGAGGAAGTGCCAAGGCAGCCAAGTTATCAATAGCAGTGACGGTGATGACATCATTCACGATAGGGTTCCTTCTGTTCTTATTCTTCTTGTTCTATAGGGAACGACTTGCTTACATATTCACTGCAAATGAAAAAGTGGCCGCTGCAGTTGGAGACTTGTCTCCTTTGCTTGCTTTCTCTATATTACTAAACAGTGTTCAACCTGTTCTCTCTGGAGTAGCTGTAGGAGCTGGGTGGCAAAGCATTGTAGCATATGTGAACATAGGGTGTTATTACATCATAGGAATCCCTGTTGGAGTTGTACTCAGTAACATTCTCCATTTGCAAGTCAAGGGAATCTGGATTGGGATGTTATTTGGGACATTGGTTCAGACAATTGTGCTAACAATTATTACCTACAAAACTGATTGGGACGAGCAGGTAGTATTGGCTCGACGTCGCGTTAACAAGTTTTCTGTGGACGTTGAAGAAGCAGACGCGAGCTCTGAAGGATAA 1446 0.4357 MEESARKLLSEEDDDLPLIKRVWKECKVMWIVAAPAIFTRASTFGINVTSQAFVGHIGSKELAAFALVFTVLIRFANGILFGMASALSTLCGQAYGARRYGMMGVYLQRSWIVLYLTCFLLLPLFFFTTPIMKMLGQDESIADVAGTISLWSIAVIFAYVLSFTFQTFLQSQSKNVVISFLAAFSIAIHMSLSWLLTIKYKLGIPGAMISTILAYWIPNIGQFMFVTCGWCPETWNGFSFLAFKDLWPVVKLSLTSGAMLCLELWYNTILVLLTGSMKNAEVEIDALSICLNINGWEMMISFGFLAAASVRVSNELGRGSAKAAKLSIAVTVMTSFTIGFLLFLFFLFYRERLAYIFTANEKVAAAVGDLSPLLAFSILLNSVQPVLSGVAVGAGWQSIVAYVNIGCYYIIGIPVGVVLSNILHLQVKGIWIGMLFGTLVQTIVLTIITYKTDWDEQVVLARRRVNKFSVDVEEADASSEG 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0942 481 CDD MATE_eukaryotic 25 458 IPR045069 GO:0042910|GO:1990961
Alju01g0942 481 Pfam MatE 35 195 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Alju01g0942 481 Pfam MatE 258 417 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Alju01g0942 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 454 - -
Alju01g0942 481 NCBIfam MATE family efflux transporter 35 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0942 Alju-ChrAlju01 6995866 6999046 Tandem