Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0934 ATGAAAATGCAGATAGCATGGTCATTTTGCACCAGGCATTATCTTTCTTCTCATGGAGTCTTAATTGATTCACTGGGAAGGATAAACATGTCTCCTGTTCATCATATTTATCAGGAGGTAGCAGTTGGGCAAATGGAAACACTGTATCATTCTAAATTTGATGTTCTTGATATTACAGAGGCGATCTACTGCAGCTTTATGTGCACTAGTCTTGTGTGGTTGAAATCCTTCATTAGTTACTATGATGGTCCTAAAATGAATCTAAAAAGACTAGTGACAGAAATGGAGCAGGAATGTCGCAAGACAAAGCATTTACCCCAAAGTTTTTGTGGCAGAAGAGGAGCTATGGGAAGGCCTCCTTGCTGTGAGAAAGCTGGCATCAAGAAGGGTCCATGGACACCAGAGGAGGACATCATTCTTGTTTCTTACATCCAAGAACATGGTCCAGGAAATTGGAGATCAGTTCCTACTAATACTGGGTTGTCAAGGTGCAGCAAAAGTTGCAGGCTGAGATGGACGAACTACCTCAGGCCAGGAATCAAGAGAGGGAACTTCACTCCACATGAGGAAGGAATGATAATTCATTTGCAAGCTCTACTGGGTAACAAATGGGCAGCAATAGCTTCGTACCTTCCTCAAAGGACAGATAATGATATAAAGAACTATTGGAACACCCATCTGAAGAAGAAGCTGAAAAAACTTCAAACAGGATTGGACCCCCACCTGGCAGCAAACTCCACAACAACTACTCACTCTACTTCAAAAAGCTTTAATAATAATGAGAGCAAGAGTTCAGACGACAACCATGGTGTCTCGTCTCAAAGGTTAAGTCAATCTCAATCATCCACCTATGCTTCGAGCACTGAGAACATATCTCGCCTCTTAGAAAGTTGGATGAGATCTTCACCAAAGCCAGACACAACTAATAATCATAATCTCAAAGCAACAACCCAAGTAGATCACAAAGAGCTTCTTCTTCAGAGCAACAGCAACATGGAAAATAATAGCAGTAACATGGTGATGATGAAGTCTGGTCTAAGTCTGATGTCCAACCAAAACAAAGACGAGGGAGAAGAGGGAGGTGGTGATATGATGTCCCATGAAGAGTTTGATTCCATTTTGTCTTATGAGAACCTCAATAATGCTGCTTGGGACAAGTCCACAGGCGATTCTTTGCCTCCAACAACTCACAAGAGTACAACTTCTGAAGCTGCTGATCATGATGATGAGAGGAATAAGCAAAGATCTGAGAACAGTACTGCCGATCCTCCATTGTCAGTTCTTGAGAAGTGGCTTTTGGATGAAAATGTTGGTCAAGTAGAGGAGATGATGGAATTATCCCTTACTTTCTAA 1353 0.4176 MKMQIAWSFCTRHYLSSHGVLIDSLGRINMSPVHHIYQEVAVGQMETLYHSKFDVLDITEAIYCSFMCTSLVWLKSFISYYDGPKMNLKRLVTEMEQECRKTKHLPQSFCGRRGAMGRPPCCEKAGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQTGLDPHLAANSTTTTHSTSKSFNNNESKSSDDNHGVSSQRLSQSQSSTYASSTENISRLLESWMRSSPKPDTTNNHNLKATTQVDHKELLLQSNSNMENNSSNMVMMKSGLSLMSNQNKDEGEEGGGDMMSHEEFDSILSYENLNNAAWDKSTGDSLPPTTHKSTTSEAADHDDERNKQRSENSTADPPLSVLEKWLLDENVGQVEEMMELSLTF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0934 450 SUPERFAMILY Homeodomain-like 126 223 IPR009057 -
Alju01g0934 450 Gene3D - 128 181 - -
Alju01g0934 450 Coils Coil 450 450 - -
Alju01g0934 450 CDD SANT 184 226 IPR001005 -
Alju01g0934 450 MobiDBLite consensus disorder prediction 385 400 - -
Alju01g0934 450 Gene3D - 183 269 - -
Alju01g0934 450 SMART sant 181 229 IPR001005 -
Alju01g0934 450 SMART sant 128 178 IPR001005 -
Alju01g0934 450 FunFam Transcription factor MYB60 183 256 - -
Alju01g0934 450 Pfam Myb-like DNA-binding domain 129 176 IPR001005 -
Alju01g0934 450 Pfam Myb-like DNA-binding domain 182 227 IPR001005 -
Alju01g0934 450 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 116 335 - -
Alju01g0934 450 MobiDBLite consensus disorder prediction 300 321 - -
Alju01g0934 450 CDD SANT 131 176 IPR001005 -
Alju01g0934 450 MobiDBLite consensus disorder prediction 385 426 - -
Alju01g0934 450 MobiDBLite consensus disorder prediction 401 417 - -
Alju01g0934 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 124 180 IPR017930 -
Alju01g0934 450 ProSiteProfiles Myb-like domain profile. 177 227 IPR001005 -
Alju01g0934 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 231 IPR017930 -
Alju01g0934 450 FunFam MYB-related transcription factor 128 181 - -
Alju01g0934 450 ProSiteProfiles Myb-like domain profile. 124 176 IPR001005 -
Alju01g0934 450 MobiDBLite consensus disorder prediction 242 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0934 Alju-ChrAlju01 6933085 6937799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0934 116 258 MYB Transcription Factor Family AT3G01140 66.207 4.85e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g0934 Myb_DNA-binding 2.6e-15 CL0123