Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0927 ATGGAAGATCAAGGTGAGGGGCAACAACAACAAGAGAGCAATAATGGTCCGAACCAAGGCTCGGAGAGGAGCGAGCCGGTGAGGTCACGGTGGACTCCAAAGCCAGAACAAATCCTCATCCTTGAGTCCATCTTCAACAGTGGCATGGTCAACCCCCCCAAGGAGGAAACTATCCGCATCAGGAAGCTTCTCGAGAAGTTCGGCTCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGCAGGCCTCCCTCGAGCAGCGAAACCAGCAGCTTCATCAGCCAGCTCAGAAGCTTCATGGCGGTGCAACAATTACTTATGATCATCACCATCATCAACAACCTCATGCCACCTCATCTTCTGATCCAGTACTTCCTCCGGTTACTACCATGCCTTTTGCCGCTGCTTCTCCGTCGTCGTCTTTCCTTGATCTCTCCGGTTCGGCGTCATCTTCTTCTTGTGGCATGCTTGGCGGCCAAGAAGCCCTTGACGGTCTTTTCTCATCGGCGGTTTCTCAAATGGGTTTCCCTGAATTTGATCACTCTTCGGCTGCTTCCTCAGCTCTATACCCTCCTCCCTCTCATGCTTCGTCCTTCAACTATCATTCTGGACTGGTCACAGTGTTTATCAATGGAGTGGCAACAGAAGTTCCAAGGGGAGCATTGGACATAAAAACAATGTTTGGGCAAGATGTGGTGCTAGTTCATTCCTCCGGAGTGCCACTTCCCACCAATGAGTTTGGTTTCCTGATGCAGAGCTTGCAGCATGGCGAAAGCTACTTTCTGGTGATTAGAGCACCTCCAAATTATTTATATAATTCATTGATTTCCCATATTTATTTGTGTCTCAAAGCCAACATAATTAAAAGCAACTAG 912 0.5033 MEDQGEGQQQQESNNGPNQGSERSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQASLEQRNQQLHQPAQKLHGGATITYDHHHHQQPHATSSSDPVLPPVTTMPFAAASPSSSFLDLSGSASSSSCGMLGGQEALDGLFSSAVSQMGFPEFDHSSAASSALYPPPSHASSFNYHSGLVTVFINGVATEVPRGALDIKTMFGQDVVLVHSSGVPLPTNEFGFLMQSLQHGESYFLVIRAPPNYLYNSLISHIYLCLKANIIKSN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0927 303 MobiDBLite consensus disorder prediction 7 26 - -
Alju01g0927 303 MobiDBLite consensus disorder prediction 1 33 - -
Alju01g0927 303 MobiDBLite consensus disorder prediction 83 108 - -
Alju01g0927 303 Gene3D - 26 96 - -
Alju01g0927 303 FunFam WUSCHEL-related homeobox 11 28 95 - -
Alju01g0927 303 Pfam Homeodomain 28 88 IPR001356 GO:0003677
Alju01g0927 303 ProSiteProfiles 'Homeobox' domain profile. 24 89 IPR001356 GO:0003677
Alju01g0927 303 SMART HOX_1 26 93 IPR001356 GO:0003677
Alju01g0927 303 SUPERFAMILY Homeodomain-like 22 95 IPR009057 -
Alju01g0927 303 PANTHER WUSCHEL-RELATED HOMEOBOX 11 8 277 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0927 Alju-ChrAlju01 6877674 6879494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0927 20 300 Wox Gene Family AT3G03660 50.871 7.83e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju01g0927 Homeodomain 3.4e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0927 01 6877674 6879494 Alju01g0927 01 6877674 6879494 ECH