Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0914 ATGTTATTAATTATTAGATATTCAATTCCCTTCTTACTTGAAGACATAAGATACCTAAGCCGAAACCTTGGCGTGGAAGATGATAGGTTGTCCAAAACCTTCTATGAAGTATTGAAAATAGCAATGGATCGAAAATTCACAATGGGGCGAAAATCCGAGCAAGTACAAGCTGCTTGTCTCTACATTGCATTCCGCTATGTTCAAGGTGCAGTATTTTTACAGCTTTGTAAAGTATTAAGGCTTGAAGAGCACCCAATTGTTCAAAAGCCTGTTGATCCCAGTCTTTTTATTATTAAATATACAAACAATTTGTTAAACCAGAGGAGTAAGGTTGTCATTGATACTGTTATCCAAAACAAGGTTGTCACTGATACTGCACTGAGCATTGTTGCAAGCATGAAACGTGATTGGATGCAGACTGGGAGGAAGCCTAGTGGTTTATGTGGGGCAGCATTGTACATTGCTGCCCTTGCACATGGGTTTAAATACTCAAAGTCGGATATTCTAAGAATTGTCCATGTATGTGAAGCAACATTGACCAAGCGTTTGGTCGAGTTTGAGAATACAACCTCTGCAAGCTTGACAGTTGAGGAGTTGAATATGATGGCAAAAGAGCATGGAGAAATTCCTATAGAAAAACCAAATTGTGGATCAGATGAACATGTCTCAAAGGATCTAGTGTGCGAACACAAGGATAAGGGTGTCCCACATTATGACCATGGACTATGTGAAGCCTGTTATAAGGATTTTGTTGAACTCTCTGGAGGACTGGATGGTGGTCTGGATCCTCCTGCATTCCAGCGTGCTGAGAGGGACAGAATGACGAAATCACTTTGTGAGGAAAGCGACAACCAATCAAGTGGTTTGGAAAAAGCATCAAATGGTGCGTGTGCTGGCAGGAAAGAAGAGTTGCATGCTCCTGGGCCAGAATGAGATGGTGTTGAGCAAATGGCTACTAAATATGGTGGAAATGATGAATCTCATGGAGAAGATATGAGCGCTAAAACTGATAGTGAATCAGAAAGCTACCTTCACAATGAGGACGAGAAGCGTTACAAGACGCTTATATGGACTGAAATGAACAGGGAGTATCTTGAGGAGGAAGCAGCCAAGGAAGCTGCTGTTGCTGCTGCTAAGGAAGCTTTTGAGGCAAATTTTCAAAACTGTTCTGAGGATATGCTAGCAGCAAAAGAACTCGCTGAATCTGCTGCTGCAGCTGTGGCCAAATCCAGAAAGGTGACTGTTGAATCATTTTCTCTTTGTGCAGTAGTGCTTGAGCGTGGACACAGTTGTAAGCTGTCAAAGTTACAGCATGCTTCATTAAATAACTGCTCATTGGATAATCTGTTCTTGAAATCCACCATTGGATTAGAGGCTCGTTTCAAGCAGATCATGGAAAAGAAGCAGAGACGTGCCCAAGAGGCAAAAAATTCCGGTCCAGCTCAATCTGCCGCAGAGGCTACTCGGAAAATGTTGATAAATAAGAGGCTCAGCTCCAAAGTCAATCTTGACCGCTTGGACAATTTATTTGATGATATTGTAAGTCTCTCCATGAAATGTTTTGTACTTGAGGCATGTATACACTATTCACTACGCATTGTGCATGAGGCTCCGCTGAACAAGAAAGTACGATTCAAGCTGGACTGTGATAAAGATTGTAAACTAGAGCCTGAACTAGAGGACAAAGTCAAAAGAGATGATGATATGGGATCAGTGGATGAATTTGAGTATGGAGGTTATATGGAAGAGGAAAATAATTTGGATGATGATAAATTGGCGGAATATGACGATGAAAATGATTATGATTAA 1809 0.4118 MLLIIRYSIPFLLEDIRYLSRNLGVEDDRLSKTFYEVLKIAMDRKFTMGRKSEQVQAACLYIAFRYVQGAVFLQLCKVLRLEEHPIVQKPVDPSLFIIKYTNNLLNQRSKVVIDTVIQNKVVTDTALSIVASMKRDWMQTGRKPSGLCGAALYIAALAHGFKYSKSDILRIVHVCEATLTKRLVEFENTTSASLTVEELNMMAKEHGEIPIEKPNCGSDEHVSKDLVCEHKDKGVPHYDHGLCEACYKDFVELSGGLDGGLDPPAFQRAERDRMTKSLCEESDNQSSGLEKASNGACAGRKEELHAPGPEXDGVEQMATKYGGNDESHGEDMSAKTDSESESYLHNEDEKRYKTLIWTEMNREYLEEEAAKEAAVAAAKEAFEANFQNCSEDMLAAKELAESAAAAVAKSRKVTVESFSLCAVVLERGHSCKLSKLQHASLNNCSLDNLFLKSTIGLEARFKQIMEKKQRRAQEAKNSGPAQSAAEATRKMLINKRLSSKVNLDRLDNLFDDIVSLSMKCFVLEACIHYSLRIVHEAPLNKKVRFKLDCDKDCKLEPELEDKVKRDDDMGSVDEFEYGGYMEEENNLDDDKLAEYDDENDYD 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0914 602 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 14 501 IPR000812 GO:0006352|GO:0070897
Alju01g0914 602 MobiDBLite consensus disorder prediction 570 602 - -
Alju01g0914 602 Pfam Brf1-like TBP-binding domain 336 387 IPR011665 -
Alju01g0914 602 Pfam Brf1-like TBP-binding domain 463 511 IPR011665 -
Alju01g0914 602 Gene3D - 11 88 - -
Alju01g0914 602 SUPERFAMILY Cyclin-like 16 70 IPR036915 -
Alju01g0914 602 MobiDBLite consensus disorder prediction 577 602 - -
Alju01g0914 602 MobiDBLite consensus disorder prediction 265 279 - -
Alju01g0914 602 Pfam Transcription factor TFIIB repeat 119 188 IPR013150 GO:0017025
Alju01g0914 602 FunFam Transcription factor IIIB subunit 92 191 - -
Alju01g0914 602 CDD CYCLIN_TFIIIB90_rpt2 89 189 - -
Alju01g0914 602 Gene3D Single helix bin 312 374 - -
Alju01g0914 602 SUPERFAMILY Cyclin-like 91 198 IPR036915 -
Alju01g0914 602 MobiDBLite consensus disorder prediction 259 339 - -
Alju01g0914 602 Gene3D - 92 196 - -
Alju01g0914 602 MobiDBLite consensus disorder prediction 324 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0914 Alju-ChrAlju01 6779140 6793886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0914 13 492 Inorganic Solute Cotransporters AT2G01280 37.924 2.88e-85 273