Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0903 ATGTTGGACTTGGAACCCGTTTCGAAATCCTGTAAGTCCCATGAAGAAGAGGAAGGTGAGAAAAGATCTCTACTCCTTCAATGCGCAGAACTCATCCTCCCATGGCTAACCCCCTTGGAGCTCGCCAACGTCTCTTTAACCTGCAAAGCCTTTTCCCTAATTTCCAAAACCGTCATCCTCCGCCGCGTATCTGATTCTTCAAGAGGATTCGAGAATTGGCCTATCCCATTCTGCAACACCGTTGATGATACGCCATACGCTTTCTTCACCTACACTCCTTCCCTAATTCTACCTTCTGATTCACAATATCTTCGTCAATCATGGGGTTCGAATTTTGCTGCCACCCGTGACGGGGTTGGTAAGCTTGCTATGGAACCGGTGAGTTTAGTTGATGAAGAGGGTCAGAGTGTATCAGGATGTGACTGTGACACTTGTGGGGATGTAGGGGATGAAGATAACAGGTGTCCTTGTTCGAACTTGGCTGGGTTGGATGTGGCTAACGAGTGCGGACCGAGTTGTAAGTGCGGGTTGCAGTGTGGGAATCGTATGAGTCAGAAGGGTATTTTAGTTCGGTTGAAAATCGTGAGAGATAGGAGGAAGGGATGGGGTTTGTACGCTGACCAATTGATACAGAAAGGGCAGTTCGTATGTGAATATGCAGGTGAGCTCTTGACAACCAGGGAAGCGAGGAGGAGGCATCTGTGTTATGATGATCTTTCATCGCAAGGTAAGTTTTCTTCTGCTCTTTTGGTTGTGAAGGAGCATCTGCCATCTGGAAGGGCTTGTCTGAGGATGAACATTGATGCCACGAGAATAGGAAATGTTGCTCGGTTCTTTAATCATTCTTGTGATGGTGGTAATTTAACCACGAAATTAGTGAGAAGGTCGGGAGCTTTATTTCCTCGACTTTGTTTCTTTGCTTTAGAAGATATAGAAAGGGATGAAGAGCTTACTTTTAGCTATGGAGAAATCAGAACAAGGCCTATGGGCTTGCCATGTTTTTGTGGTAGCTCTTCTTGCTTTGGAACATTGCCTTCAGAAGACACTTAA 1050 0.4581 MLDLEPVSKSCKSHEEEEGEKRSLLLQCAELILPWLTPLELANVSLTCKAFSLISKTVILRRVSDSSRGFENWPIPFCNTVDDTPYAFFTYTPSLILPSDSQYLRQSWGSNFAATRDGVGKLAMEPVSLVDEEGQSVSGCDCDTCGDVGDEDNRCPCSNLAGLDVANECGPSCKCGLQCGNRMSQKGILVRLKIVRDRRKGWGLYADQLIQKGQFVCEYAGELLTTREARRRHLCYDDLSSQGKFSSALLVVKEHLPSGRACLRMNIDATRIGNVARFFNHSCDGGNLTTKLVRRSGALFPRLCFFALEDIERDEELTFSYGEIRTRPMGLPCFCGSSSCFGTLPSEDT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0903 349 Gene3D SET domain 49 327 IPR046341 -
Alju01g0903 349 ProSiteProfiles Post-SET domain profile. 329 345 IPR003616 -
Alju01g0903 349 SUPERFAMILY SET domain 72 342 IPR046341 -
Alju01g0903 349 Pfam SET domain 201 322 IPR001214 GO:0005515
Alju01g0903 349 Pfam Pre-SET motif 67 182 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju01g0903 349 ProSiteProfiles SET domain profile. 190 322 IPR001214 GO:0005515
Alju01g0903 349 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 61 339 - -
Alju01g0903 349 SMART set_7 190 328 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0903 Alju-ChrAlju01 6702877 6704397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0903 65 344 Su(var)3-9 homologs AT1G73100 29.299 6.36e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju01g0903 SET 9.7e-19 No_clan