LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g0902	ATGGCAGAAAAATTCTATCCTCAGAAGCTTTTGATTTTCGTGACACTTCTACTTTCTATCAATCATTCAGAGCAGCTGCAATCCTCACAGCCTCAGACTCTTCTAAGAATCAAACGGCTCTTGAACTTTCCTTCTGCTTTAAGTAGCTGGAATAGCAGCACAGACTTCTGCAGTCCTGACTCAGATTCTTCTCAAACTGTTGTTTGCTATGAAGATACCATCACGCAGCTTCACATAATAGGTGATAAGAGAGCTTCGCCACTTCCTAAAAATTTCTCAACAGCTACCTTTTTCGCAACACTAGCCAGGCTTCCCCATTTGAAAGTCCTCACACTGGTTTCTCTTGGCATCTGGGGTCCACTTCCTGGCAAGATTGCTCGATTGTCATCGCTGGAAATAGTTAATATGAGTTCAAATTTTCTATATGATGTCATCCCTCAGGAGCTTTCATTACTGTCAAATCTTCAAACACTCATTCTTGATGACAACAAGCTTTCTGGTAAGCTTCCAGATTGGCTTGATTCTGTTCCAGCCTTAACAGTGTTAAGTCTGAAAAATAATCTGTTCAATGGGTCTGTACCTGATTCTGTGGGTAGCTTGGAAAATCTGAGAATTCTTTCACTTTCTCACAATAACTTTTATGGACCAGTACCCGATTTAAGGCATTTGACAAATCTTCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCAGTTTCCTCGACTTGGTACCAAGTTGGTCACACTTGTTCTAAGAAACAATAGTTTCAGATCCAGTGTCCCTGCTGAAGTGACCACGTTTCATCAGCTTGAGAGATTTGATATCTCATCAAATTCATTTGTGGGGCCATTCCACCCTGCATTGTTATCTCTTCCATCTATCACTTATCTCAACATTTCTGGAAACCAACTCACTGGAATGCTTTTTGAAAATCTAACCTGTAGTTCTGAACTCCAAGTTGTGGATCTTTCATCAAATCTGTTGACTGGAAGCTTACCTGAATGTTTACAGTCAAAAAGCAGTGATAAAACCGTCCTTTATGCTAGAAATTGTCTGCAAGATATGAATCAAAATCAGCACCTACTTACCTTTTGTCATACTGAAGCCTTAGCTGTGGGAATATTACCTGAGAGTAAGAAACACAAGGATCAATCTAAGGTTGGCCTTTCTATAGGGATGGTGAGTGGGATTCTTGGAGGAGTAGCGCTTGTTGCCTTGGTTTTCTTCATTATTAGAAGAGGAAATGTCAGAAGCAACATTAAGAATCCCCCAACAAGATTAATATCAGAGAGTGCAACTCCTAAATACTCATCTAAGCATCTTTCTGATGCAAGGTACATATCTCAAACAATGAAGTTGGCAACAGTTGGCCTGCCCAGTTATCGAACTTTCTCTCTGGAAGAGATTGTGGCAGCTACAAAAAATTTTGACACATCCTCTTTCATGGGTGAAAGTTCTCAGGGACAGATGTACAGAGGCAGGCTGAGGGACGGTTTTCTTGTTGCTATAAGATGCGTGAAAATGAAAAGAAGATACAGCATTCATTACTTTTTGCACCACATAGAACTGATATCACAACTCAGGCATCGCCATTTAGTCTGTGCCCTAGGACACTGCTTTGAATATTATTTAGAAGATTCAACTGTCAGCAGAATATTTCTTGTCTTCGAATACGTTCCAAATGGCACACTCAGGAGCTGGATCTCAGATAGGCGCTCAAAAAAATCACTTGGTTGGACCCAACGCATAGAAGCTGCAATTGGAGTAGCAAAGGGAATTCAGTATTTGCACACTGGCATTGTCCCTGGTATATATTCAAACAAGCTCAAAACAACAGATGTTTTAATGGATCAGAATCTTGGTGCAAAAATCTGTAGTTATAACCTGCCCTTTTTATCTGACATGGGAAAGGTTGAGCACGGAACTTCCTCCAGTGGCTCAAAAAGTCCAAGCATTAATAAAAGTGCAAAACATGAAGATAAGTCGGATATATACGACTTTGGAGCAATACTACAGGAACTGATTTTGGGAAGGGCAGCAAAATCAAGGAATGAAGTGGATGGTTTGAGGGTCCTGTTTCAAGCGAGCATAATTGGTGATGTGGAAGCTAGAAGGAGCATTGTAGATGCAGGAGTTCGCAATTCATGCTTGGACCAATCGTTGGGGACGATGATGGAGATTTGCACGAGGAGCTTGGCCAAAGATCCAGCAGAAAGACCTTCCATTGAGGACGTCTTGTGGAATCTGCAGTTTGCTGCTCAGGTTCAGGACGCATGGCGAGGGGAATCTCAAAGCAGTGAGGGGTCTCCTGGCTCTCCTTTTGAACCTCGACGACTCACCTTCCATTAG	2352	0.4171	MAEKFYPQKLLIFVTLLLSINHSEQLQSSQPQTLLRIKRLLNFPSALSSWNSSTDFCSPDSDSSQTVVCYEDTITQLHIIGDKRASPLPKNFSTATFFATLARLPHLKVLTLVSLGIWGPLPGKIARLSSLEIVNMSSNFLYDVIPQELSLLSNLQTLILDDNKLSGKLPDWLDSVPALTVLSLKNNLFNGSVPDSVGSLENLRILSLSHNNFYGPVPDLRHLTNLQVLELDDNAFGPQFPRLGTKLVTLVLRNNSFRSSVPAEVTTFHQLERFDISSNSFVGPFHPALLSLPSITYLNISGNQLTGMLFENLTCSSELQVVDLSSNLLTGSLPECLQSKSSDKTVLYARNCLQDMNQNQHLLTFCHTEALAVGILPESKKHKDQSKVGLSIGMVSGILGGVALVALVFFIIRRGNVRSNIKNPPTRLISESATPKYSSKHLSDARYISQTMKLATVGLPSYRTFSLEEIVAATKNFDTSSFMGESSQGQMYRGRLRDGFLVAIRCVKMKRRYSIHYFLHHIELISQLRHRHLVCALGHCFEYYLEDSTVSRIFLVFEYVPNGTLRSWISDRRSKKSLGWTQRIEAAIGVAKGIQYLHTGIVPGIYSNKLKTTDVLMDQNLGAKICSYNLPFLSDMGKVEHGTSSSGSKSPSINKSAKHEDKSDIYDFGAILQELILGRAAKSRNEVDGLRVLFQASIIGDVEARRSIVDAGVRNSCLDQSLGTMMEICTRSLAKDPAERPSIEDVLWNLQFAAQVQDAWRGESQSSEGSPGSPFEPRRLTFH	783

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g0902	783	MobiDBLite	consensus disorder prediction	760	783	-	-
	Alju01g0902	783	Pfam	Protein tyrosine and serine/threonine kinase	482	747	IPR001245	GO:0004672\|GO:0006468
	Alju01g0902	783	Pfam	Leucine rich repeat N-terminal domain	29	58	IPR013210	-
	Alju01g0902	783	Gene3D	Transferase(Phosphotransferase) domain 1	561	760	-	-
	Alju01g0902	783	SUPERFAMILY	L domain-like	30	354	-	-
	Alju01g0902	783	ProSiteProfiles	Leucine-rich repeat profile.	202	224	IPR001611	GO:0005515
	Alju01g0902	783	Pfam	Leucine rich repeat	153	213	IPR001611	GO:0005515
	Alju01g0902	783	ProSiteProfiles	Protein kinase domain profile.	477	752	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju01g0902	783	Gene3D	Ribonuclease Inhibitor	27	242	IPR032675	-
	Alju01g0902	783	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	27	245	-	-
	Alju01g0902	783	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	560	766	-	-
	Alju01g0902	783	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	450	559	-	-
	Alju01g0902	783	PANTHER	UNNAMED PRODUCT	90	680	-	-
	Alju01g0902	783	Gene3D	Ribonuclease Inhibitor	243	362	IPR032675	-
	Alju01g0902	783	SUPERFAMILY	Protein kinase-like (PK-like)	456	752	IPR011009	-
	Alju01g0902	783	Gene3D	Phosphorylase Kinase; domain 1	448	559	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g0902	Alju-ChrAlju01	6698721	6702360	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g0902	43	771	Miscellaneous Gene Families	AT3G03770	60.136	0.0	846

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Alju01g0902		PK_Tyr_Ser-Thr	1.2e-19	CL0016