Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0893 ATGGACAGGCTCGTAAGATTAGACCCATCAAACATTGTTCCCATCAGAGTTGAAGCAGGGCAAAAATGCGTTGGCCATATCACATTACGCAACGTTATGTACACCATGCCTGTGGCCTTTAGGCTTCAACCTCTGATCAAAACTCGTTACACAGTGAAACCTCAGTCTGGAATTATATCTCCTTTGGCCACAGTTACACTGGAGATCGTCTATCATCTTCCACCAGGAGCTAGTCTTCCTCACTCTTATCCTCACTCCGATGACTCTTTCCTTCTTCACAGTGTGGTGGTTCCTGGTGCAGCAATTAAAGAGTCTTCCTCTATGTTTGACTCTGTTCCAAGCGACTGGTTCACCACTAAGAAGAAACAGGTGTTCATAGACAGTGGCATCAAGATCATGTTTGTGGGTTCGCCAATTTTGGCTCAACTTGTTACAGATGGTTCCATGGATGGTATCAGAGAGGCCCTGGAACGAAGCGACCCATCATGGAAGGCTTCAGACTCAATGGACTCGCAAGGCCAGACTTTACTTCATTTGGCTATTTCACAGAGCAGACCTGATCTTGTTCAATTACTCCTCGAATTCAAGCCCGATATAGAAACTCCAAATCGTGCTGGTTCAACCCCACTTGAGGCTGCTTCTTCCTTCGGTGAATCCTTAATCGTTGAGCTTCTATTAGCTCACAAGGCCAACACTGAACGATCAGAATCATCCATTTGGGGGCCAATTCACCAAGCAGCTAAAGGAGGACACTTGGAGGTCCTGAGGCTTCTTTTACTGAAAGGGGCTAAAGTAGATTCCCAAGCAAAAGATGGTAGCACAGCTTTGCATCTTGCAGTTGAAGAACGAAGACGAGATTGCGCTAGGCTTCTGTTGGCTAACGGTGCTAGAACCGACGTTCGTAACAGCAGAGACAGCGACACACCGTTACACATAGCCTCATCCACCGGCGATGAGAACATGGTCAAGCTATTGCTACAAAAGGGTGCGAATAAGGAGGTGAGAAATGGGTTGGGGAAAACCGCGTACGACGTCGCTGCCGATAATGGATATACGCGTCTCTTCGACGTGCTTAAATTAGGGGACGATCTCTGCGTGGCGGCGAGAAAAGGGGATGTGAGAACGATGCAGAAGCTGATCGAGAACGGAGCATCCATTAATGGAAGAGACCAACACGGCTGGACGGCGCTTCACAGAGCCGCCTTCAAAGGACGAACGGATGCGGTTAGGGTTCTGCTAGAGAAAGGGGTGGATGTGGATTCTAAAGACGAGGATGGGTACACGGCTTTACATTGCGCGGCGGAGTCCGGCCACGCCGACGTGACGGAGCTGTTAGTGAAGAAGGGAGGAGATGTTGAAGCGAGGACCAATAAGGGCGTGACCGCGTTACAAATAGCAGAGTCGCTGCACTATGTGGGGATCACGAGGATACTCATCAACGGCGGGGCTAGTAAGGAGAACAACGGTCAGATTCCGGTACCGGCGGCGAATATTCCGTTTTGGAAACAAATGGACGGTGGGGAGAAGAAGAATAAGAAGATAATCAGAAACAGAGGGCTTCGAGGAAGCTTCGATCGTTCGGCGGCTCTGGCGGTGATGTAG 1602 0.495 MDRLVRLDPSNIVPIRVEAGQKCVGHITLRNVMYTMPVAFRLQPLIKTRYTVKPQSGIISPLATVTLEIVYHLPPGASLPHSYPHSDDSFLLHSVVVPGAAIKESSSMFDSVPSDWFTTKKKQVFIDSGIKIMFVGSPILAQLVTDGSMDGIREALERSDPSWKASDSMDSQGQTLLHLAISQSRPDLVQLLLEFKPDIETPNRAGSTPLEAASSFGESLIVELLLAHKANTERSESSIWGPIHQAAKGGHLEVLRLLLLKGAKVDSQAKDGSTALHLAVEERRRDCARLLLANGARTDVRNSRDSDTPLHIASSTGDENMVKLLLQKGANKEVRNGLGKTAYDVAADNGYTRLFDVLKLGDDLCVAARKGDVRTMQKLIENGASINGRDQHGWTALHRAAFKGRTDAVRVLLEKGVDVDSKDEDGYTALHCAAESGHADVTELLVKKGGDVEARTNKGVTALQIAESLHYVGITRILINGGASKENNGQIPVPAANIPFWKQMDGGEKKNKKIIRNRGLRGSFDRSAALAVM 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0893 533 ProSiteProfiles Ankyrin repeat profile. 205 237 IPR002110 GO:0005515
Alju01g0893 533 SUPERFAMILY Ankyrin repeat 167 496 IPR036770 -
Alju01g0893 533 ProSiteProfiles Ankyrin repeat region circular profile. 305 336 - -
Alju01g0893 533 Pfam MSP (Major sperm protein) domain 5 107 IPR000535 -
Alju01g0893 533 SMART ANK_2a 392 421 IPR002110 GO:0005515
Alju01g0893 533 SMART ANK_2a 205 234 IPR002110 GO:0005515
Alju01g0893 533 SMART ANK_2a 271 300 IPR002110 GO:0005515
Alju01g0893 533 SMART ANK_2a 172 201 IPR002110 GO:0005515
Alju01g0893 533 SMART ANK_2a 425 454 IPR002110 GO:0005515
Alju01g0893 533 SMART ANK_2a 458 487 IPR002110 GO:0005515
Alju01g0893 533 SMART ANK_2a 305 334 IPR002110 GO:0005515
Alju01g0893 533 SMART ANK_2a 359 388 IPR002110 GO:0005515
Alju01g0893 533 SMART ANK_2a 238 267 IPR002110 GO:0005515
Alju01g0893 533 SUPERFAMILY PapD-like 2 150 IPR008962 -
Alju01g0893 533 Gene3D Immunoglobulins 1 134 IPR013783 -
Alju01g0893 533 ProSiteProfiles Ankyrin repeat profile. 392 424 IPR002110 GO:0005515
Alju01g0893 533 Pfam Ankyrin repeats (3 copies) 243 336 IPR002110 GO:0005515
Alju01g0893 533 Pfam Ankyrin repeats (3 copies) 159 232 IPR002110 GO:0005515
Alju01g0893 533 Gene3D - 430 480 IPR036770 -
Alju01g0893 533 Gene3D - 145 360 IPR036770 -
Alju01g0893 533 ProSiteProfiles Major sperm protein (MSP) domain profile. 4 135 IPR000535 -
Alju01g0893 533 ProSiteProfiles Ankyrin repeat profile. 364 391 IPR002110 GO:0005515
Alju01g0893 533 ProSiteProfiles Ankyrin repeat profile. 242 270 IPR002110 GO:0005515
Alju01g0893 533 ProSiteProfiles Ankyrin repeat region circular profile. 172 204 - -
Alju01g0893 533 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Alju01g0893 533 ProSiteProfiles Ankyrin repeat region circular profile. 242 266 - -
Alju01g0893 533 ProSiteProfiles Ankyrin repeat region circular profile. 425 457 - -
Alju01g0893 533 Pfam Ankyrin repeats (many copies) 394 446 IPR002110 GO:0005515
Alju01g0893 533 PRINTS Ankyrin repeat signature 441 455 IPR002110 GO:0005515
Alju01g0893 533 PRINTS Ankyrin repeat signature 393 408 IPR002110 GO:0005515
Alju01g0893 533 ProSiteProfiles Ankyrin repeat region circular profile. 271 302 - -
Alju01g0893 533 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Alju01g0893 533 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Alju01g0893 533 Gene3D - 361 429 IPR036770 -
Alju01g0893 533 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 170 358 - -
Alju01g0893 533 ProSiteProfiles Ankyrin repeat profile. 425 457 IPR002110 GO:0005515
Alju01g0893 533 ProSiteProfiles Ankyrin repeat region circular profile. 392 424 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0893 364 483 Ion Channels AT4G32500 31.126 2.08e-09 58.5