Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0886 ATGCAGACGAGGACGGTTCAAGTAAAGAATGTTTCAGATCTAGCTACTGAGAGAGAGATTCACGAATTTTTCTCGTTTTCTGGAGAAATCGAGCACATTGAGATCCAAAGTGAATCCGGGAAATTAAAGACAGCATATGTGACTTTTAAAGATCCAAAAGCACTTGAGATTGCGTTACTGTTATCGGGAGCAACAATAGTTGATCAGATTGTGAGTATAACTCCTTCGGAGAACTATGTGCCGAAACAAGAGATGCAGGAAGTAATGGTGGTGGCAAATGCTACAAATGTTACTCCTGTTGAGGAGAGAGCAAGCCCCGCTAGCAGTGGGAGAATGTATGTAAGTAGAGCACAAGATGTAGTTACGAGTATGCTCGCTAAAGGTTCAGCAATTAGACAAGATGCCTTGAATAAAGCTAAAGCATTTGACGAAAAGCATCAGTTTACTGCCAATGCATCTGCTAAGGTTGCTTCTTTTGAGAAGAGGGTTGGTCTTACAGAGAAATGGACAGTTGGCATTTCTGTAGTTAATGAGAAGGTGAAGTATGTTGATCAAAGGCTTCATGTTTCAGATAAAACAATGGCTGCAATACTAGCGGCTGAGAGGAAGATAAATGATACTGGATCAGCGGTCAAAACAAGCAGATATGTGACTGCTGGAACGACCTGGTTAAATGGTGCTTTTGGGAAGGTGGCAAGGGCTGGACAACTTGCCGGTACAAAAACTAGAGAAAAGTTCCATATGGCTGTATCTAACTTGACAGCGAAGGAGCCACCGGTTGCTGCATAA 789 0.4246 MQTRTVQVKNVSDLATEREIHEFFSFSGEIEHIEIQSESGKLKTAYVTFKDPKALEIALLLSGATIVDQIVSITPSENYVPKQEMQEVMVVANATNVTPVEERASPASSGRMYVSRAQDVVTSMLAKGSAIRQDALNKAKAFDEKHQFTANASAKVASFEKRVGLTEKWTVGISVVNEKVKYVDQRLHVSDKTMAAILAAERKINDTGSAVKTSRYVTAGTTWLNGAFGKVARAGQLAGTKTREKFHMAVSNLTAKEPPVAA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0886 262 CDD RRM_Vip1_like 6 74 IPR034360 -
Alju01g0886 262 Gene3D - 1 89 IPR012677 -
Alju01g0886 262 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Alju01g0886 262 SUPERFAMILY RNA-binding domain, RBD 2 83 IPR035979 GO:0003676
Alju01g0886 262 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Alju01g0886 262 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 248 - -
Alju01g0886 262 SMART rrm1_1 5 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0886 Alju-ChrAlju01 6574414 6577687 Transposed