Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0876 ATGAGGAGTCCAAGAGTGAAAGGGAAGATCACGCCATGTTGTAGCAAGGTAGGGATAAAGAGAGGACCATGGACGCCGGAGGAAGATGAGGTCTTGGCCAATTTCGTCAAGAAAGAAGGCGAAGGACGGTGGCGCACCCTTCCCAAACGGGCGGGGCTCCAACGCTGCGGCAAGAGCTGCCGTCTCCGATGGATGAACTATCTCCGTCCCTCCGTCAAGAGAGGCCATATTGCTCCCGATGAGGAAGATCTCATCCTTCGCCTTCACCGCCTCCTGGGCAACAGGTGGTCTCTGATAGCTGGGAGGATACCTGGGAGGACCGATAACGAGATCAAGAACTACTGGAATACCCATCTAAGCAAGAAGCTTATAAGTCAGGGAATAGACCCTAGGACTCACAAGCCTTTACTCTCTTTCCACAATAATTCCAAAACTCATGAATCCAATAATCCTGATCAATCATCTGCACCACAGATTAATGGTGGCTGCAGCCAGCAAAATCAGACAAATAATGTCATCCAAATCAACAGTTCTGTCGTCACTATTGGGAATAATTCGGGAATGACAAGTAGCGGCAAAGTGGCAGCGAGTCTTGAAGAAAATGGGGTTGAGGCTGAAGGAGAGGTTGATGACAAGATTATGGGGGAAGAAGATGATACCCTATCTTCGTTTCTGGAATCTTTGATCAACAACAACGACAACCAAGTACTTGGGAATCAACAGTCGCAGGATGATGTCGACCTCCACGTGTTTCCTGCTCCGCCACCACATCCAACAATGGCTTCTTCTTCTTCTTCCCACCAATTTTTCGATCTTTCCTTCTGGGAATCTGAATTCCAGAGTTTCGGAGGAGATCATCAACAGTATGGTTGCCCTTTCAAGTAA 885 0.4825 MRSPRVKGKITPCCSKVGIKRGPWTPEEDEVLANFVKKEGEGRWRTLPKRAGLQRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLLSFHNNSKTHESNNPDQSSAPQINGGCSQQNQTNNVIQINSSVVTIGNNSGMTSSGKVAASLEENGVEAEGEVDDKIMGEEDDTLSSFLESLINNNDNQVLGNQQSQDDVDLHVFPAPPPHPTMASSSSSHQFFDLSFWESEFQSFGGDHQQYGCPFK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0876 294 MobiDBLite consensus disorder prediction 136 166 - -
Alju01g0876 294 Gene3D - 21 73 - -
Alju01g0876 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Alju01g0876 294 SMART sant 73 121 IPR001005 -
Alju01g0876 294 SMART sant 20 70 IPR001005 -
Alju01g0876 294 MobiDBLite consensus disorder prediction 131 166 - -
Alju01g0876 294 CDD SANT 79 119 IPR001005 -
Alju01g0876 294 CDD SANT 23 68 IPR001005 -
Alju01g0876 294 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Alju01g0876 294 Gene3D - 78 157 - -
Alju01g0876 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Alju01g0876 294 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 11 221 - -
Alju01g0876 294 FunFam Myb transcription factor 18 74 - -
Alju01g0876 294 FunFam transcription repressor MYB5-like 78 148 - -
Alju01g0876 294 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Alju01g0876 294 Pfam Myb-like DNA-binding domain 79 119 IPR001005 -
Alju01g0876 294 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Alju01g0876 294 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0876 Alju-ChrAlju01 6494793 6495791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0876 6 231 MYB Transcription Factor Family AT3G13540 58.850 5.74e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g0876 Myb_DNA-binding 6e-15 CL0123