Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0854 ATGTACTATCATCAGCAACAACAAGCAAAGAACATTCACTCTTTAAGGATGTCCAACCCTCCTGAGAGGCATACGATGGTCCATGGTGGAAGTGGAAATGGAGACTCAGGACTTGTCCTCTCAACTGATCCTAAGCCAAGGCTAAAATGGACACCAGATCTCCATGAACGCTTTGTAGAAGCAGTCAACCAGCTAGGAGGGCCAGACAAAGCTACACCAAAAACAGTATTGAAACTTATGGCGATTCCTGGACTTACTCTATACCACTTAAAGAGTCATCTACAGAAATACAGACTCAGTCAAAATTTGCATGGACAGGGCAATAGTGGAATCCATAGAAACGAAGCAGCCAGCCAAACGTCTGAGACAAGTGGAGTCCATATGAAAAATTTAAGCATCAGACTTCAGCCAAACAAGATGGGCCTTGAATCCAGGAACCTAGAAATAAATGAGGCACTACAGATGCAAATTGAAGTGCAAAGAAGGCTACATGAACAGCTCGAGGTACAGAGACACTTGCAGCTTCGTATAGAGGCTCAAGGGAAGTATCTCCAAGGAGTGCTGGAGAAAGCACAAGAGACATTAGAGATACAGAATCTTGGCACATCAGGACTTGAAGCTGCTAAGGTTCAACTCTCTGAACTGGCATCCAAAGTATCAACTCAATACATAGAGCCTGCATTTTCAGAGCTGAAAGAATTACAGGCACTTTGGCCTCAGCAAGCACAAGTAGTGACCAAAACCACCAATTGTAGTGAAGGATCTCAGAGAGGCCGAAACACACATTACACGGGTTTAAATTTGAGATTATATGATGGATCTCCATTTTTAAGATCAAAAGAGGGTACACAGGAGCCTGTTCTTCTGAAGTCTGATCTCACATTATGTGACCAGCTGCAGGAGAAAATGCTGTTTCTTTCCCCACCAAACGATGAACATAGAAGAACCTCAAAACTCACATCCATGGATGTTGAACTTGAAGGAGAAGAAGAAGGCTTGGGGAAACCGCATGTTTTGAAGGAAGAGGAAGAAAGCTGGTTGTTGAGAAAGGAGAGAGCAGAAAATGGGGTTGTGACAGGTAAACTGAACTATGAGAAAATTTCTCAAGACTATAAGATGTCTAGCTATGAAACCACACTGGACCTAAATGTTCATGATAAAAACGATGCTTCTTCTAACTGCCAACAGTTTGACTTGAATGGATTTGGCTGGAATTGCTAG 1221 0.4275 MYYHQQQQAKNIHSLRMSNPPERHTMVHGGSGNGDSGLVLSTDPKPRLKWTPDLHERFVEAVNQLGGPDKATPKTVLKLMAIPGLTLYHLKSHLQKYRLSQNLHGQGNSGIHRNEAASQTSETSGVHMKNLSIRLQPNKMGLESRNLEINEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQGVLEKAQETLEIQNLGTSGLEAAKVQLSELASKVSTQYIEPAFSELKELQALWPQQAQVVTKTTNCSEGSQRGRNTHYTGLNLRLYDGSPFLRSKEGTQEPVLLKSDLTLCDQLQEKMLFLSPPNDEHRRTSKLTSMDVELEGEEEGLGKPHVLKEEEESWLLRKERAENGVVTGKLNYEKISQDYKMSSYETTLDLNVHDKNDASSNCQQFDLNGFGWNC 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0854 406 MobiDBLite consensus disorder prediction 1 37 - -
Alju01g0854 406 SUPERFAMILY Homeodomain-like 44 101 IPR009057 -
Alju01g0854 406 MobiDBLite consensus disorder prediction 1 15 - -
Alju01g0854 406 Pfam MYB-CC type transfactor, LHEQLE motif 148 194 IPR025756 -
Alju01g0854 406 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Alju01g0854 406 Gene3D - 44 102 - -
Alju01g0854 406 MobiDBLite consensus disorder prediction 105 129 - -
Alju01g0854 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Alju01g0854 406 NCBIfam myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Alju01g0854 406 Coils Coil 150 170 - -
Alju01g0854 406 FunFam Myb family transcription factor 44 102 - -
Alju01g0854 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 22 277 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0854 Alju-ChrAlju01 6344617 6346621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0854 77 405 G2-like Transcription Factor Family AT3G04030 43.590 9.26e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju01g0854 Myb_DNA-binding 3.7e-08 CL0123