Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0851 ATGGAAGAAGCGGCGGCAGCAGTACTGGTGGACAAAGAAGAGGCGGAGGCCCTGGATTTGCCTCCGGGTTTCAGGTTTCATCCGATGGACGAGGAGATCATCACTTGTTATCTGACGGAGAAGGTGCTGAACAGCAGTTTCAGTGCAACTGCAATCGGTGAAGCTGATTTGAACAAGTGTGAGCCTTGGGATCTCCCTAAGAGGGCGAGGATGGGGGAGAAAGAGTGGTACTTCTTCTGTCAAAGGGACCGGAAATATCCGACGGGGACGAGAACGAATAGAGCGACGGAGTGCGGGTACTGGAAGGCGACCGGAAAAGATAGGGAGATATACAGAGGGAAAGGCAACCTGGTGGGGATGAAGAAGACCCTCGTCTTCTACAGAGGGAGGGCTCCCAAAGGTGAGAAAACTGGCTGGGTTATGCATGAATTCCGATTAGAGGGCCAATTCGCCACTTACAACCTCCCCAGGGCAGCTAAGGATGAATGGGTGGTGTGCAAGATTTTCCACAAGAACACAGACGTCAAAAAGATTCCTGAGCTTCTAAGGATCAACTCTCTCAGCGATCATCTTGTTGATTTCTCTCCCTCGCTCCCGCCTCTCATGGAGCATCCTTCTTTTACTAACGCCGATCAGCACGGCTACAGTAATTGTGGCGATGAATTCAAGGATCAGCCGTCATCGGACGGCTATTATTACCCCGACTTCGCCGGCAACAATCAGACGACGGTGATGAAGGTAGAACAACAAGAATACAGAAACTATGAGATGATGACGATGATTCCAAGTTACTGCACCGGCGACGCCAATCATAATCCTCTCTCGCGAGGAACAATCCGGAGTAATCCGAGTTTGTGGGCTGAGCAGAATAATGCTGTGATGTCGGATTACAGGAACAGAGATGTGGTGGGAGGTGGCGTGAAGAATGAAACGGTGTCGTGGGGAATGGATAAACAGTGCACTATGGAGGTATCGGCGAGGAGAGACATCCTAGGAAGGAATAAGGCAGTGTACGAGGATGACTTCATCCTCCACAAGCCTCCATCTCTTGGTTCCTTTCCAGATCTGGGCTGCCTCTGGGATGACTACTGA 1092 0.5092 MEEAAAAVLVDKEEAEALDLPPGFRFHPMDEEIITCYLTEKVLNSSFSATAIGEADLNKCEPWDLPKRARMGEKEWYFFCQRDRKYPTGTRTNRATECGYWKATGKDREIYRGKGNLVGMKKTLVFYRGRAPKGEKTGWVMHEFRLEGQFATYNLPRAAKDEWVVCKIFHKNTDVKKIPELLRINSLSDHLVDFSPSLPPLMEHPSFTNADQHGYSNCGDEFKDQPSSDGYYYPDFAGNNQTTVMKVEQQEYRNYEMMTMIPSYCTGDANHNPLSRGTIRSNPSLWAEQNNAVMSDYRNRDVVGGGVKNETVSWGMDKQCTMEVSARRDILGRNKAVYEDDFILHKPPSLGSFPDLGCLWDDY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0851 363 ProSiteProfiles NAC domain profile. 20 171 IPR003441 GO:0003677|GO:0006355
Alju01g0851 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 240 - -
Alju01g0851 363 FunFam NAC domain-containing protein 100-like 29 175 - -
Alju01g0851 363 SUPERFAMILY NAC domain 16 172 IPR036093 GO:0003677|GO:0006355
Alju01g0851 363 Gene3D NAC domain 29 176 IPR036093 GO:0003677|GO:0006355
Alju01g0851 363 Pfam No apical meristem (NAM) protein 21 146 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0851 Alju-ChrAlju01 6311667 6313046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0851 7 213 NAC Transcription Factor Family AT5G18270 68.203 2.35e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g0851 NAM 5.5e-38 No_clan