Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0847 ATGCTTGGTCCGATAAAGGCCGCGATTGGAGATGCATTGCTCACCTTTATGTGGGTCTTCTGCGCATCCACGATTGGATTAGCCACTAGCTTCATAACAGCATCACTCGGTATTCAGCATCTATCCTTCAATGGTCTTAATTACGCATCAATTCTCGTCACTACCGTCCTTGTCTTTTCCCTTGTCTTTATCTTCACCATCATCGGTAATGCCTTGGGTGGTGCTACCTTCAACCCAACCGGCACGGCTGCCTTTTATGCCGTTGGTCTCGGCTCTGACACCCTTTTCTCCATGGCTCTCCGTTTTCCTGCTCAGGCGTTAGGTGCTGCGGGTGGTGCTTTGGCAATTATGGAGGTGATACCGCCGAAATTTAGACACATGATCGGCGGACCTTCGTTGAAGGTTGATTTGCATACTGGAGCTGTTGCTGAAGGGGTTCTGACATTCGTGATCACTCTGGCTGTTCTTTTTATCATACTCAGGGGTCCTCGCAGTGAATTGCTGAAGACCTGGTTACTGGCTATATCTACTGTGGCTCTGGTCATGGCTGGCTCTGCTTACACCGGCCCCTCCATGAATCCTGCCAATGCATTTGGTTGGGCATACGTAAACAACTGGCACAATACATGGGACCAATTCTATGTGTACTGGATTTGCCCCTTCATTGGAGCAATAGTAGCTGCCTGGGTGTTCCGGATTTTGTGTCCCCCACCTGCACCAGTAAAGAAACAGAAGAAAGCCTGA 744 0.4946 MLGPIKAAIGDALLTFMWVFCASTIGLATSFITASLGIQHLSFNGLNYASILVTTVLVFSLVFIFTIIGNALGGATFNPTGTAAFYAVGLGSDTLFSMALRFPAQALGAAGGALAIMEVIPPKFRHMIGGPSLKVDLHTGAVAEGVLTFVITLAVLFIILRGPRSELLKTWLLAISTVALVMAGSAYTGPSMNPANAFGWAYVNNWHNTWDQFYVYWICPFIGAIVAAWVFRILCPPPAPVKKQKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0847 247 SUPERFAMILY Aquaporin-like 5 241 IPR023271 -
Alju01g0847 247 PANTHER AQUAPORIN SIP1-1 3 247 IPR044222 GO:0015250
Alju01g0847 247 FunFam Aquaporin SIP1-1 2 247 - -
Alju01g0847 247 Pfam Major intrinsic protein 5 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0847 247 Gene3D Glycerol uptake facilitator protein. 4 245 IPR023271 -
Alju01g0847 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0847 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0847 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0847 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0847 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g0847 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0847 Alju-ChrAlju01 6269627 6272468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0847 2 247 Major Intrinsic Protein MIP AT5G18290 53.629 3.82e-82 244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0847 01 6269627 6272468 Alju01g0847 01 6269627 6272468 ECH