Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0804 ATGGCGAATCTGTTACTTCTTTTGATGTTCCTTTTTGGAGCAATCTTTTGTGGGCAATCCAAGTTCGTAGTGTATAACACCTCGCAGAGCATAGTCCCTGGTAAGCTAAATGTTCATCTGGTTCCTCACACCCACGACGACGTTGGTTGGTTGAAGACCGTTGATCAGTACTATGTTGGCTCTAATAATTCGATTCAGGGTGCTTGTGTTCAAAATGTATTAGACTCCTTGGTTCCTTCGCTGTTGGTTGACAAGAATCGGAAATTTATCTACGTTGAGATAGCCTTTTTTCAGCGATGGTGGAGGGACCAGAGCGAAGCTGTTAAGCATGTAGTTAAGCAACTTGTCAGTTCGGGTCAATTAGAGTTCATAAATGGTGGCATGTGTATGCATGATGAGGCAGCAACACATTACATAGACATGATTGATCAGACAACGATGGGACATCGATTCCTGAAAGAGGAGTTTGGTGTGACTCCTAGAATTGGTTGGCAAATTGATCCCTTTGGACATTCTGCTGTGCAGGCATACTTATTGGGATCTGAAATTGGGTTCGATTCACTTTTCTTTGGCCGAATAGATTATCAAGATAGAGCTAAGCGCAAAAATGAGAAGAGTCTTGAGGTTATCTGGCAAGGAAGTAAGAGCCTTGGCTCGTCTGCTCAGATTTTTGCTGGTGCATTCCCTGAGAATTATGAGCCACCTGCTGGATTTTACTTTGAAGTTAATGATAATTCACCAATTGTTCAAGATAACATTGATTTATTTGATTACAATGTCCAAGATCGAGTAAATGATTTTGTTGCTGCTGCTGTATCACAGGCAAACATTACTCGAACAAGTCATATAATGTGGACTATGGGAACTGATTTTAAGTATCAATATGCAAACTCATGGTTCCGGCAGTTGGACAAGCTTATTCACTATGTCAACAAGGATGGACGTGTCAATGCCCTCTACTCTACACCATCTATATATACTGATGCAAAATATGCTACAAAAGAGACATGGCCATTAAAGACTGACGATTTCTTCCCCTATGCAGATCGAGTAAATGCTTACTGGACAGGATACTTTTCCAGTAGGCCAGCCTTCAAATACTATGTCAGATTAATGAGTGGCTATTATTTGGCGGCAAAACAGCTAGAACTTTTTAAGGGGAGGATGAATTCAGGACCAAATACCGACACATTGGCTGATGCTTTAGCAATTGCTCAACACCATGATGCAGTGTCTGGTACTGAAAAGCAGCATGTGGCCAATGATTATTCTAAACGATTATCAATTGGCTACAAAGAGGCGGAGCAATTAGTTGCATCATCACTTGCTTGCTTGGTTGAGTCTGCGTCATTTACAGGATGTCAGAACCCAGTTACCAAGTTTCAACAGTGTCCGCTTATGAATATAAGTTACTGTCCTCCATCAGAAGTTGATCTGATTCAAGGGAAAAATTTGGTTATTGTGGTTTACAACTCTCTTGGCTGGAGGAGGAATGAAGTGGTTCGAATTCCTGTCAGTAATGAAGATGTTATAGTTTATGATTCTGAGGGTCAAGAAATAGTGTCGCAACTTCTACCTCAGGCTGAGGTCTATGCGTCCTTAAGAAACTACCATGTCATGGCATATCTGGGAGAAACTCCAGCCAAGGCACCAAAGTATTGGCTTGCATTTACAGTATCTGTGCCACCTCTTGGTTTTAGCACATACACAGTCTCAGCTGCCAAAGGGACAGGTCCCACCAGATCATCTGTGTATACATATCAAATTAGTGAAACATCCAAAATTGAAGTTGGTCAAGGGAATTTGAAGCTTACCTTTTCTCCAAATCGAGAAAAGTTTACCAACTATGTTAATACCAGGAACTCGGTTGAGGAACAGATTAAACAGAGTTATTTGTACTACTCAGGATATAATGGAACTGATGATGAAGTGCCACAGAATTCTGGTGCCTATGTATTCCGTCCAAATAGCACATATCTCTTCAAGCATGAAAGACAGGTTCAATTGACTGTTATGCGTGGACCCTTAATAGATGAAGTACATCAACAGATAAATCCATGGATATATCAGATTACCAGACTGCACAAGGAAAAAGAGCATGTTGAAGTAGAGTTTATTGTTGGCCCCATTCCTATTGATGATGGAATTGGTAAAGAAGTTGTCACTAGGATTTCAACCTCAAAGGAAACCAACAAATCATTCTACACAGATTCTAATGGGCGTGATTTTATCAAAAGGATACGTGATTACAGATCAGACTGGGACCTTGAAGTAAACCAGCCTATTGCTGGAAACTATTATCCTATTAATCTTGGGATATATGTAAAAGATAATTCAACAGAATTTTCAGTTTTGGTGGATCGGTCTGTGGGAGCATCCAGCTTAGCTGATGGAGAAATAGAGCTAATGGTTCACAGGAGACTGCTACTTGATGATTCAAGAGGTGTTGCAGAGGCTTTAAATGAAACAGTCTGTGTTTTTGATGATTGCAAAGGCCTAATAATCCAAGGAAAAGTATACTATAGAATAGATCCCCTAGGCGAGGGTGCTAAGTGGCGTCGTACAGTTGGCCAGGAAATATATTCTCCACTACTCTTGGCCTTTTCTGAACAGGATGGAGATGACTGGATAAATTCCCATATACTTACATATTCAGGAATTGATTCTAATTACAGATTACCAGACAACGTTGCAATTATAACCTTACAGGAACTAGATGGGGGGAAAGTTCTCCTTCGGTTAGCACATCTATACGAGACTGACGAAGACAAGGATCTCTCTGCAATGGCAAGTGTGGAGCTGAAAAAGCTGTTTCCAAGGAAAAAGATCAAAGAGGTGAAAGAGATGAGTTTATCTGCGAATCAAGAAAGGACAGATATGGAGAAAAAGAGACTTAAGTGGAAAGTAGAAGGCTCTACTGGTTCTTGGGACGAACGTGTTCGTAGGGGAGTGCCTGTTGATCCTGAAGACCTATCTGTGGAGCTTGGCCCAATGGAAATCCGCACCTTTATCGTTTACTTTGAATATGAATCTGACATAAAAAGCTTTTGA 3051 0.4077 MANLLLLLMFLFGAIFCGQSKFVVYNTSQSIVPGKLNVHLVPHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLVPSLLVDKNRKFIYVEIAFFQRWWRDQSEAVKHVVKQLVSSGQLEFINGGMCMHDEAATHYIDMIDQTTMGHRFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGSEIGFDSLFFGRIDYQDRAKRKNEKSLEVIWQGSKSLGSSAQIFAGAFPENYEPPAGFYFEVNDNSPIVQDNIDLFDYNVQDRVNDFVAAAVSQANITRTSHIMWTMGTDFKYQYANSWFRQLDKLIHYVNKDGRVNALYSTPSIYTDAKYATKETWPLKTDDFFPYADRVNAYWTGYFSSRPAFKYYVRLMSGYYLAAKQLELFKGRMNSGPNTDTLADALAIAQHHDAVSGTEKQHVANDYSKRLSIGYKEAEQLVASSLACLVESASFTGCQNPVTKFQQCPLMNISYCPPSEVDLIQGKNLVIVVYNSLGWRRNEVVRIPVSNEDVIVYDSEGQEIVSQLLPQAEVYASLRNYHVMAYLGETPAKAPKYWLAFTVSVPPLGFSTYTVSAAKGTGPTRSSVYTYQISETSKIEVGQGNLKLTFSPNREKFTNYVNTRNSVEEQIKQSYLYYSGYNGTDDEVPQNSGAYVFRPNSTYLFKHERQVQLTVMRGPLIDEVHQQINPWIYQITRLHKEKEHVEVEFIVGPIPIDDGIGKEVVTRISTSKETNKSFYTDSNGRDFIKRIRDYRSDWDLEVNQPIAGNYYPINLGIYVKDNSTEFSVLVDRSVGASSLADGEIELMVHRRLLLDDSRGVAEALNETVCVFDDCKGLIIQGKVYYRIDPLGEGAKWRRTVGQEIYSPLLLAFSEQDGDDWINSHILTYSGIDSNYRLPDNVAIITLQELDGGKVLLRLAHLYETDEDKDLSAMASVELKKLFPRKKIKEVKEMSLSANQERTDMEKKRLKWKVEGSTGSWDERVRRGVPVDPEDLSVELGPMEIRTFIVYFEYESDIKSF 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0804 1016 SMART Alpha_mann_mid_2 353 427 IPR015341 GO:0004559|GO:0006013
Alju01g0804 1016 FunFam Alpha-mannosidase 473 596 - -
Alju01g0804 1016 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 896 1004 IPR041147 -
Alju01g0804 1016 FunFam Alpha-mannosidase 882 1009 - -
Alju01g0804 1016 Gene3D - 882 1013 - -
Alju01g0804 1016 Gene3D - 473 595 IPR013780 -
Alju01g0804 1016 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 348 IPR000602 GO:0004559|GO:0006013
Alju01g0804 1016 SUPERFAMILY Families 57/38 glycoside transferase middle domain 353 451 IPR028995 -
Alju01g0804 1016 Pfam Glycosyl hydrolases family 38 C-terminal domain 599 814 IPR011682 GO:0004559|GO:0006013
Alju01g0804 1016 PANTHER ALPHA-MANNOSIDASE 6 1008 - -
Alju01g0804 1016 Pfam Alpha mannosidase middle domain 353 445 IPR015341 GO:0004559|GO:0006013
Alju01g0804 1016 Gene3D Glycoside hydrolase 38, N terminal domain 36 316 IPR027291 -
Alju01g0804 1016 Gene3D - 596 862 - -
Alju01g0804 1016 Gene3D Glycoside hydrolase family 38, central domain 317 395 IPR037094 GO:0004559|GO:0006013
Alju01g0804 1016 SUPERFAMILY Glycoside hydrolase/deacetylase 25 349 IPR011330 GO:0005975
Alju01g0804 1016 FunFam Alpha-mannosidase 396 451 - -
Alju01g0804 1016 CDD GH38N_AMII_LAM_like 36 312 - -
Alju01g0804 1016 SUPERFAMILY Galactose mutarotase-like 455 1007 IPR011013 GO:0003824|GO:0005975|GO:0030246
Alju01g0804 1016 FunFam Alpha-mannosidase 315 395 - -
Alju01g0804 1016 Gene3D Glycoside hydrolase family 38, central domain 396 451 IPR037094 GO:0004559|GO:0006013
Alju01g0804 1016 FunFam Alpha-mannosidase 36 316 - -
Alju01g0804 1016 FunFam Alpha-mannosidase 596 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0804 Alju-ChrAlju01 5948897 5962509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0804 1 919 Glycoside Hydrolase AT5G13980 70.486 0.0 1372