Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0792 ATGGCGACCAGATACTGGGTAGTCTCTCTCCCCGTTCAAAATTCGGCATCTGCTCTCTGGGCTCAATTGCAGGAACAAATCTCCAAGCACTCCTTCGATACTCCTCTTTACAGATTCAATATACCTAATCTCCGGGTTGGAACCCTAGATTCTCTTCTTTCTCTCAGCGATGATCTTGTGAAGGCAAACAGTTTCATGGAAGGAGTGTCACACAAGATCAGGCGACAGATTGAGGAATTGGAGAAAGTTTCTGGTGTTGTGAGCAGTGGGCTGACGGTTGATGGTGTGCCAGTCGATTCATACTTGACCAGGTTTGTTTGGGATGAAGCGAAGTACCCGACTATGTCACCTTTGAAGGAGATTGTGGATGGTATTCACGGTCAAGTGGCAAAGATTGAGGATGATCTGAAGGTTCGTGTTGCTGAGTATAACAATATCCGCAGTCAACTAAATGCTATCAACCGAAAGCAAAGTGGAAGCTTAGCTGTCCGTGATCTTTCCAACCTGGTAAAACCTGAGGATATTATAACTTCAGAACATTTAACTACTCTACTTGCAATTGTTCCCAAGTATTCTCAAAAGGACTGGCTCTCAAGCTACGAAACATTGACAAGCTATGTGGTACCCAGGTCTTCCAAGCTGTTGTATGAGGATAATGAGTATGCTCTTTATACTGTAACACTCTTCACACGTGTTGCAGACAATTTTAGAACTAGTGCACGTGAAAAAGGGTTCCAAATTCGTGATTTTGAGTACAGTCAAGAAACACATGAAAGTCGGAAGCAGGAGCTAGAGAAGTTGGTGCAAGATCAGGAAAGCTCAAGAGGAATTCTTTTGCAATGGTGTTATACCAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCTATACGTGTATTTACTGAGAGCATTCTGAGATATGGTTTGCCACCATCTTTCCTGGCAGCTGTGTTAGCTCCGTCTGCAAAAAGTGAGAAGAAAGTACGTTCAATACTTGAAAGCTTGTGTGACAGTGCAAACAGTGCATACTGGAAGACTGAGGATGAAGCAGGGGGTGGTATGGCCGGTCTAGCCGGGGATTCTGATGCACATCCATATGTCTCCTTCACTATCAATCTCGTATGA 1131 0.4412 MATRYWVVSLPVQNSASALWAQLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLVKANSFMEGVSHKIRRQIEELEKVSGVVSSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHGQVAKIEDDLKVRVAEYNNIRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLTTLLAIVPKYSQKDWLSSYETLTSYVVPRSSKLLYEDNEYALYTVTLFTRVADNFRTSAREKGFQIRDFEYSQETHESRKQELEKLVQDQESSRGILLQWCYTSYGEVFSSWMHFCAIRVFTESILRYGLPPSFLAAVLAPSAKSEKKVRSILESLCDSANSAYWKTEDEAGGGMAGLAGDSDAHPYVSFTINLV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0792 376 Coils Coil 254 274 - -
Alju01g0792 376 CDD V-ATPase_C 5 373 IPR004907 GO:0033180|GO:0046961|GO:1902600
Alju01g0792 376 Pfam V-ATPase subunit C 5 369 IPR004907 GO:0033180|GO:0046961|GO:1902600
Alju01g0792 376 SUPERFAMILY Vacuolar ATP synthase subunit C 1 375 IPR036132 GO:0015078|GO:0033180|GO:1902600
Alju01g0792 376 FunFam V-type proton ATPase subunit C 163 251 - -
Alju01g0792 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 2 375 IPR004907 GO:0033180|GO:0046961|GO:1902600
Alju01g0792 376 Gene3D Vacuolar atp synthase subunit c; domain 1 6 335 - -
Alju01g0792 376 Gene3D - 41 312 - -
Alju01g0792 376 Gene3D - 163 251 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0792 1 375 Primary Pumps ATPases(2) AT1G12840 82.933 0.0 659
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0792 01 5863467 5866926 Alju01g0792 01 5863467 5866926 ECH