Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0777 ATGGGAGAGCCGGGAGGCATGTACCAGTACGAGCTGCTCAACCAGGCCTCCGTCTCCCCCACGACCCTCCGGAGGTCGTCGTCACAGCCTTCTTCTTCCCCTCGCATTTTTCAGTGCCGTTACTGCCCCCGCAAGTTCTGCACCTCCCAGGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGAGAGCCGCCGACCGCAACCTCACCCCCACCGCCCTCCCCTCTCCCCAGCCTCACCCCGACCCCTCCCACTTCTTCGACCCCTACTGGCTCCACGTCGACCCCATTCATCACTTCCCCCACCACCCTCCTCCTCCTCCTCCTCCTCCGCCCTCTCCCCCCAAGCCTTCCGATCCTCTCCTCGACCACGTCAACCACCTCGACCTCACCCTTCGCTTGTGA 405 0.6568 MGEPGGMYQYELLNQASVSPTTLRRSSSQPSSSPRIFQCRYCPRKFCTSQALGGHQNAHKRERAADRNLTPTALPSPQPHPDPSHFFDPYWLHVDPIHHFPHHPPPPPPPPPSPPKPSDPLLDHVNHLDLTLRL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0777 134 Gene3D Classic Zinc Finger 17 78 - -
Alju01g0777 134 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Alju01g0777 134 PANTHER ZINC FINGER PROTEIN JAGGED 19 111 IPR045320 GO:0003700
Alju01g0777 134 SUPERFAMILY beta-beta-alpha zinc fingers 34 64 IPR036236 -
Alju01g0777 134 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Alju01g0777 134 MobiDBLite consensus disorder prediction 101 119 - -
Alju01g0777 134 MobiDBLite consensus disorder prediction 50 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0777 Alju-ChrAlju01 5770017 5770421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0777 32 90 C2H2 Transcription Factor Family AT5G14010 59.322 2.46e-15 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju01g0777 None None None