LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g0765	ATGGAGAAAAAGCCTTCTGAAAATTCTGACAAAGACGAGGAGAACAACGCCGGCGAGACTTCTCATCGTCATGCATCATCGGAACCAAGAAATCCCGATGATGATGCCATTGCCGAACACCCGTACGATGATCATGCCCAGGCAGATTCCGTTACAGAGGGAGAGACCACAGATGTGCTCCCCACCGTTGCTCTCACCCCCGCCAAGTTCTCTGCTGACGTTGATTCATGGATTGAGACTATGCTGCACCAGAATGCAGATATCACAGAGATCCCTGATTGCGTTGACAAGTTCTTGCATCTCTTCGAAGAAAATATTGTCTCGTACGATGCTCTAGAAGGCAGACCGAAATGGGGCGAGGTTCCGGAGAAAGATTCGTCGTTCCTGGAATCGGCGAGTCGGATTAGAAAGCTGTCCGAGGTGCTGAGTCAATCTCAATGTTCCTCGCAGCATATCAACGAACGAAAAGATTCGTTGGTCAACCGCATCGGGGTCATGCGACAGGGGGCCATGTCGTATTTGGAGGAAGCGTTCCGGATGCTCCTGGAAAAATATCGAAATCAAAATAAAGGCGAAATCGAGTCGAGTGGTCATCATGATCTGAAAGTGGAGCAGGACAATTCTGCGCCGTCGGATTCTGAGCATTCGAATTTCCCGGGTTATTCTGAAGAAACCACAAGCAGTCTGAACAAGATAGCCAAGGAGATGATATTGTCTGGATATGAATCCGAATGTTGCCAGGTTTATGTTATTTCAAGGAGAAATGCATTCGAAGAGAGACTGAATAAGTTAGGGTTCGAGAAAATTAGCATTGATGAGATTCAGAAGCTGACATGGGAATCTTTAGAGGACGAGATCCCGACGTGGATTAAAACCTTCAAGGAATGTGCCCGTAATTACTTCCCCGGAGAATTGAAGCTCGTGGAATCTGTGTTCAAAGAGCACCAGTCCATAGGGGATGGCCTCTACTGCAACTTAACTCGTGGCGTCGTCATTCAGCTTCTCAATTTCGCCGAAGGAGTGGCCATGACGAAGCGCTCCGTCGAGAAGCTATTCAAATTTCTTGACATGTGTGAGACCTTGGGGGTGGTGATTTCCGGCTTGAAGCGTGTACTCACAGAAGAGCGTGGGGGTGAGCTCATGGCGGAAACAGCGTCGGCGAGAAACAGACTGGGAGAGGCCGCGATAAGCATATTATGTGATCTTGAGAATTCGATCAAAGCGGAAGCGGGGAAAGCGGTTCCCGGCGGAGCGGTTCATCCGTTGACCCGCTACGTCATGAACTATCTCCCATTGGCTTGCGAGTACAAGGACACGTTAGATCTAGTTTTCAAGGAGCACAAAAAGCTTCAAGGAGCCGACTCAACTGGAGGGTCTCACCAGCATCATCAGAAAAATGATCATGGGGACGACGACAAGGTGGAGTCGCCTTTCGCAGAGCAAATGATGAGGGTGATGGAATTACTGGACGCGAGTCTGGAAGGGAAGGCGAAGCTGTACAAGGATGTGTCATTGGGTTGCATCTTTATGATGAACAACGGTAGGTACATACTGCAAAAGATCAAAGGGTCATCGGTTATATACCAACTGTTGGGGAACACGTGGTGTCGGAAGAAGTCGTCGGATCTAAGGGCGCAACATAAGAACTACCAGAGGGAATCTTGGGGTAAGATATTGCGCTGTCTGAACCCTGAAGGATTAACTGTCAACGGAAAAGTGCATAAGCCATATTTGAAAGAGAGGTTCAAAAGTTTTAATGCTATGTTTGACGAGTTACATAAGACTCAGAGCTCGTGGATTGTGTACGACGAACAGCTTCAGTCAGAGCTTAGGGTTTCGGTCGCAGGGCTGGTCATTCCGGCGTACAGAGCATTCGTGGGGAGGTTTTCTCAGAACTTGACGCCCGGGAGGCAAACAGAGAAATATATAAAGTACCAACCTGAGGATATAGAAAATTACATCGATAACCTGTTCTCTGGGAACCCCCAGTTCACGTCTAAAAGGAAGCTAGTATAA	2016	0.4812	MEKKPSENSDKDEENNAGETSHRHASSEPRNPDDDAIAEHPYDDHAQADSVTEGETTDVLPTVALTPAKFSADVDSWIETMLHQNADITEIPDCVDKFLHLFEENIVSYDALEGRPKWGEVPEKDSSFLESASRIRKLSEVLSQSQCSSQHINERKDSLVNRIGVMRQGAMSYLEEAFRMLLEKYRNQNKGEIESSGHHDLKVEQDNSAPSDSEHSNFPGYSEETTSSLNKIAKEMILSGYESECCQVYVISRRNAFEERLNKLGFEKISIDEIQKLTWESLEDEIPTWIKTFKECARNYFPGELKLVESVFKEHQSIGDGLYCNLTRGVVIQLLNFAEGVAMTKRSVEKLFKFLDMCETLGVVISGLKRVLTEERGGELMAETASARNRLGEAAISILCDLENSIKAEAGKAVPGGAVHPLTRYVMNYLPLACEYKDTLDLVFKEHKKLQGADSTGGSHQHHQKNDHGDDDKVESPFAEQMMRVMELLDASLEGKAKLYKDVSLGCIFMMNNGRYILQKIKGSSVIYQLLGNTWCRKKSSDLRAQHKNYQRESWGKILRCLNPEGLTVNGKVHKPYLKERFKSFNAMFDELHKTQSSWIVYDEQLQSELRVSVAGLVIPAYRAFVGRFSQNLTPGRQTEKYIKYQPEDIENYIDNLFSGNPQFTSKRKLV	671

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g0765	671	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	118	660	IPR004140	GO:0000145\|GO:0006887
	Alju01g0765	671	MobiDBLite	consensus disorder prediction	210	224	-	-
	Alju01g0765	671	MobiDBLite	consensus disorder prediction	452	474	-	-
	Alju01g0765	671	SUPERFAMILY	Cullin repeat-like	125	658	IPR016159	-
	Alju01g0765	671	Gene3D	Exocyst complex component Exo70	117	668	-	-
	Alju01g0765	671	MobiDBLite	consensus disorder prediction	1	41	-	-
	Alju01g0765	671	MobiDBLite	consensus disorder prediction	193	209	-	-
	Alju01g0765	671	MobiDBLite	consensus disorder prediction	460	474	-	-
	Alju01g0765	671	MobiDBLite	consensus disorder prediction	193	224	-	-
	Alju01g0765	671	Pfam	Exo70 exocyst complex subunit	289	655	IPR046364	GO:0000145\|GO:0005546\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g0765	Alju-ChrAlju01	5704933	5706948	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g0765	48	666	EXO70 exocyst subunit family	AT5G13990	48.160	0.0	588