Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0760 ATGATCAATTCACTTTGTGGAAGTTCATTGTCCCTCAAGAGTGAGAGTTCATGCAACAAAATGCAACAACCTACCAATTCTTCAAACGATTCTAAGAAAAATGGGAGCAGCCAGTCTTGTGATCGTATAGAGCAGACTACTACTAGTCTAACCCCTCCAAGCTTAAACCTTCCCACATTCAAATTTGACTTGGACGGAGATGTGGAGGTCCAGTCACCAGATAGTTCCATGTGGGAGTCTTTCTTCTCCGATCAGTTAGACGGCGACTTCATGATCTCTTCGCCGGTGAGGAACATGCCTTCCCCACAAGCTTCTACCTACAACTGCAACTACAACTATGCTCAGGCAATGCAAGGACAGACTCTCTCAGGCTGTTCACCTCCTCGCTTCTCATCTCAAATCGGAGCATTTACCGGCACCCACCACAAAGGTAAAAGACTCAGTCCCCTCCATAGGGTATATAACTCTCCCAACAACCAGTACATGCAGCCTGTGGAGAATCTTGCACTTCCAACCATAGAAGAATTCTTGGGAGACTATCAAGGAGATCATCATCATGGACTAGCATCAGGAGGATATTCATCCACTAATAAACTGCCTGATATTGGAAGTTCATCAGACTGCTTTGACATTTCAACTTCAATCCCATCCATGTTGGACAGCTTGAACATGGCAAGTTCTTCAAGATACTGTGGATCATCATCAGTAGTGAACGAAGAATCTTCAGTAGTGCCAAATGGCTCTCAACTTTCCCAAGAGAGCGACGTGTATCATCAGATGACCGCTTCTCTTTCACAAGCCCTCCAGCAAGAACACCAGCAAGAGAAACAGCAAAAGCAGCAAACCGAACAGCTTCATAGCTTAATGGTGCCTCTTCCCATTGGCACCGAGCAGGAGCAAGACAGTGGACTACAACTGGTGCACCTGCTATTAGCTTGTGCAGAAGCAGTGGCCAAAGAAGAATACATGTTGGCCAGAAGGTATCTGCACCATCTGAATCGTGTAGTGACGCCTCTTGGCGACTCCATGCAACGAGTAGCGTCCTGCTTCACCGAAGCCTTAAGCGCAAGGCTCGCAGCCACTTTGACCACCAAACCTAACTCCTCCAACCCTAACCCTTCTTTCTGTAGTTTCCCGCCAAACTCCATAGAAATACTCAAAATATACCAAATCGTCTACCAAGCTTGCCCTTACATCAAATTCGCCCACTTCACCGCAAACCAAGCAATATTCGAAGCATTCGAAGCGGAAGAACGAGTTCATGTCATCGACCTAGACATTCTCCAAGGTTACCAATGGCCAGCGTTCATGCAAGCCCTAGCGGCCCGACCAAGCGGGGCTCCGTTTCTGCGAATAACTGGTGTCGGGCCGAGCATAGAGTCCGTGAGGGAAACGGGTCGGTGCTTGACGGAGCTGGCACACTCTCTCAACATCCCCTTCGAATTCCACCCCGTGGGCGAGCAACTAGAAGATCTCAAGCCCCACATGTTCAACCGTCGGGTCGGGGAGGCATTGGCGGTTAATTCCGTTAACCGGCTCCACCGGGTCCCCTGTAACTACCTCGGAAATTTACTAGCGATGATAAGGGACCAAGCCCCCAACATCGTGACCCTGGTGGAGCAAGAAGCGAGCCATAACGGACCGTACTTTCTGGGGAGATTTCTGGAGGCATTGCACTATTACTCGGCGATATTTGATTCGTTGGACGCGACGTTTCCGCCGGAGTCGGCGCAGAGGGCGAAGGTGGAGCAGTATATATTTGCGCCGGAGATAAGGAACATAGTGGCGTGTGAGGGACCGGAGAGGATAGAGAGGCACGAGAGGTTGGAGAAATGGAGGAAGACAATGGAAGGGAAAGGATTCAAGGGGGTGGCACTGAGTCCGAACGCGGTGACTCAGTCGAAGATATTGCTGGGATTGTATTCGTGCGATGGGTATAGGTTGACGGAGGACAAGGGTTGCTTGCTCTTGGGATGGCAAGACCGAGCCCTAATTGCTGCTTCTGCATGGCGATGCTGA 2019 0.4988 MINSLCGSSLSLKSESSCNKMQQPTNSSNDSKKNGSSQSCDRIEQTTTSLTPPSLNLPTFKFDLDGDVEVQSPDSSMWESFFSDQLDGDFMISSPVRNMPSPQASTYNCNYNYAQAMQGQTLSGCSPPRFSSQIGAFTGTHHKGKRLSPLHRVYNSPNNQYMQPVENLALPTIEEFLGDYQGDHHHGLASGGYSSTNKLPDIGSSSDCFDISTSIPSMLDSLNMASSSRYCGSSSVVNEESSVVPNGSQLSQESDVYHQMTASLSQALQQEHQQEKQQKQQTEQLHSLMVPLPIGTEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLTTKPNSSNPNPSFCSFPPNSIEILKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPSGAPFLRITGVGPSIESVRETGRCLTELAHSLNIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPCNYLGNLLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESAQRAKVEQYIFAPEIRNIVACEGPERIERHERLEKWRKTMEGKGFKGVALSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRALIAASAWRC 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0760 672 Coils Coil 265 285 - -
Alju01g0760 672 MobiDBLite consensus disorder prediction 1 55 - -
Alju01g0760 672 Pfam GRAS domain family 306 671 IPR005202 -
Alju01g0760 672 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 262 667 IPR005202 -
Alju01g0760 672 ProSiteProfiles GRAS family profile. 297 671 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0760 Alju-ChrAlju01 5675811 5678054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0760 300 672 GRAS Transcription Factor Family AT1G66350 45.503 2.57e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju01g0760 GRAS 1.9e-132 CL0063