Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0748 ATGTGTCTACTGTTTGTGTGTAATTTTGCAGTGCAAACTGAGACTAAGATGGCTGGAGGTGTTACTGTTGTTCAACAGTTATTGAGGAGGAAACTCCAGTCTCAATCTACTTCCTCTTCTTTTTTATCATCCATCATCGTGAAAAAAGATGATGCTGGCTCTACTGGCAGCAGGTCCTTGAGAGCACTTGCATTAATTGGAGCCAGCGTCTCAGGGTTTTTGAGTTTTGCTACAACAGCTTCAGCTGATGAGGCTGAGCATGGCCTGGATTGTCCAAGCTATCCATGGCCTCACAAGGGCGTCCTCAGTTCATACGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCCTGCCATTCTATGACTTTGGTATCATATCGTGATTTGGTTGGTGTTGCTTATACAGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAAGTGGTTGATGGCCCTAATGATGAGGGTGAGATATTTACACGCCCTGGTAAACTTAGTGATCGCTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGCGGGGCTTATCCTCCCGATCTTAGTCTCATAACCAAAGGCCGCCACAATGGTCAAAATTATGTATTTTCCCTTCTTACTGGTTATCGTGACCCCCCTGCTGGTGTTTCGATTAGAGAGGGATTACATTATAATCCATATTTTCCTGGTGGAGCAATTGCCATGCCTAAAATGCTTAATGATGGTACTGTTGAATATGAAGATGGAACTCCTGCCACAGAATCTCAGATGGGAAAAGATGTCGTGACATTCCTTGCTTGGGCTGCAGAACCTGAAATGGAAGAGAGAAAACTGATGGGGTTCAAATGGATTTTTGTCCTGTCGCTGGCACTTCTTCAAGCTGCATATTTCCGTCGATTGAGGTGGTCAGTCCTGAAGTCTCGCAGGCTGGTCCTTGACGTTGTCAACTAA 978 0.4489 MCLLFVCNFAVQTETKMAGGVTVVQQLLRRKLQSQSTSSSFLSSIIVKKDDAGSTGSRSLRALALIGASVSGFLSFATTASADEAEHGLDCPSYPWPHKGVLSSYDHASIRRGHQVYTQVCASCHSMTLVSYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEIFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKGRHNGQNYVFSLLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGTVEYEDGTPATESQMGKDVVTFLAWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRRLVLDVVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0748 325 PRINTS Cytochrome C1 signature 94 113 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 PRINTS Cytochrome C1 signature 114 133 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 PRINTS Cytochrome C1 signature 192 216 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 PRINTS Cytochrome C1 signature 280 295 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 PRINTS Cytochrome C1 signature 159 179 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 PRINTS Cytochrome C1 signature 241 260 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 PRINTS Cytochrome C1 signature 261 280 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 PRINTS Cytochrome C1 signature 230 241 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 PANTHER CYTOCHROME C1 50 323 IPR002326 GO:0009055|GO:0020037
Alju01g0748 325 FunFam Cytochrome c1, heme protein, mitochondrial 281 325 - -
Alju01g0748 325 Gene3D - 281 324 - -
Alju01g0748 325 FunFam Cytochrome c1, heme protein 85 280 - -
Alju01g0748 325 ProSiteProfiles Cytochrome c family profile. 108 215 IPR009056 GO:0009055|GO:0020037
Alju01g0748 325 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 280 324 IPR021157 -
Alju01g0748 325 SUPERFAMILY Cytochrome c 89 279 IPR036909 GO:0009055|GO:0020037
Alju01g0748 325 Gene3D - 85 280 IPR036909 GO:0009055|GO:0020037
Alju01g0748 325 Pfam Cytochrome C1 family 96 312 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0748 Alju-ChrAlju01 5565586 5568496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0748 17 325 Chloroplast and Mitochondria Gene Families AT3G27240 82.637 4.73e-179 495