LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g0744	ATGGAGACCTACCCTGTGTTATTCCCTTGCCCCGATCCTTCAACTTATTCAGTTTCTTCTACTAGTGCCATGGGAGGCTCTCACCTGCTTCGCGGTCTTAGCAATAACGTGGAGATGAGTCAGATTAATAACCCTAGTGGCTTCCTGGGTTTGAGGCATGCTGCTGGAGGTGACGATCAGTTGCAGAGAATTAGAGGATGTGATGAAAGCTTATTGAGGAATAATAAGGATGAGCAGCAAGGTGGTTCTGGCAAGAAGAAGGGTGAGAAGAAGGCGCGAAAACCTAGGTATGCTTTTCAGACAAGGAGTCAGGTTGATATACTCGATGATGGCTATCGCTGGAGAAAATATGGCCAGAAAGCTGTCAAAAACAACAAATTCCCCAGGAGCTACTATAGGTGTACACATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGGCTAACCAAAGACGAGGGAGTGGTGGTGACCACATACGAGGGAGTTCACAACCATGCCATCGAGAAGACCACCGACAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTAA	564	0.4628	METYPVLFPCPDPSTYSVSSTSAMGGSHLLRGLSNNVEMSQINNPSGFLGLRHAAGGDDQLQRIRGCDESLLRNNKDEQQGGSGKKKGEKKARKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHNHAIEKTTDNFEHILSQMQIYTPF	187

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g0744	187	Pfam	WRKY DNA -binding domain	109	165	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Alju01g0744	187	Gene3D	WRKY domain	83	167	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Alju01g0744	187	FunFam	WRKY transcription factor 57	94	168	-	-
	Alju01g0744	187	SMART	WRKY_cls	108	167	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Alju01g0744	187	SUPERFAMILY	WRKY DNA-binding domain	100	167	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Alju01g0744	187	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	70	170	IPR044810	GO:0003700
	Alju01g0744	187	MobiDBLite	consensus disorder prediction	70	86	-	-
	Alju01g0744	187	MobiDBLite	consensus disorder prediction	70	96	-	-
	Alju01g0744	187	ProSiteProfiles	WRKY domain profile.	103	168	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g0744	Alju-ChrAlju01	5546707	5547704	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g0744	96	187	WRKY Transcription Factor Family	AT5G13080	86.957	3.95e-57	175

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Alju01g0744		WRKY	4.1e-26	CL0274