Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0743 ATGGACTGGGACTGGAAAGAGTTGGCGTGGGATCCATCCGGGTCGGAGCTCTCAAATGGAGCGGCTTCGGTGGATTTGAGTCTTGGAGAGACTTCCGATTTCATACAAAAATCACCCTCAAATACACCTAAGCACTTACCGAGAGACTCGAAGTCGGCACAATCGCCGAGCGGTTCGTCAAAGAGGAGCCGTACACTGAATGGATCGACTCAGAGTGTGTCGTGCACGGTGGATGGGTGCGACTCCGACCTGAGTGATTGCAGAGAGTATCATCGGCGACATAGAGTGTGTGAGAAGCACTCCAAGACGCCCATTGTGTTGATAGGGGGAAAGCAGCAGCGATTCTGCCAGCAATGCAGCAGATTTCATTCTCTGGGGGAGTTCGATGAAGTTAAGAGGAGTTGCAGAAAACGGCTTGATGGACATAACAGGCGCAGAAGGAAGCCTCAGCCGCCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGCTACAAAGGACCCCGAATCCTTCATTTTGGTAGTCCTCAGATGTACGACAACCCGTTTGTGAGAAGTATGTGGCCTGCCACTGCCAAAGCTGGAGCTGAACCAGTGATGATCAGTTATGATCAAAACAGTCTGCTAAGATCCTTTGCTAATATAGAGCATCAGCAGGACAAGCAACTTCCTCTCTTTGGGTTTAACAGCTCTAAAGAAGGCCATTGTAATGAGACTGTGTCTGGAATTCCCATGAGACAAGCAACTGCTGGTGCCATTGGCCCATCTGCCAGTGCAAATGGTGGCCGGAAGCTCGCTTCTGATTGCAAACCTGGATCTTTGGATTCAAATTGTGCTCTCTATCTTCTGTCAACACTTCAGACACAAAGTCAAGAGTTAAGCTTGGTGCAGTCCACTGTGAACTGTCCGGTGCAATCATCTCCCTTAGAAGATTTGCATTTTGATGCTGGGGACAAGTACTCATCATGCTCAGAAAGTCCACAAGAAAAGTCTACTAATCCATTATTGGTTGTGGATGCCAACACGACTAACCTCCATTGCGACCATATGATTCACATGAGGCCTGACGAAATTGTGGAAAATGGGGACTTGGCTACCTTCCCATTTTTCTGGGAGTAG 1119 0.4861 MDWDWKELAWDPSGSELSNGAASVDLSLGETSDFIQKSPSNTPKHLPRDSKSAQSPSGSSKRSRTLNGSTQSVSCTVDGCDSDLSDCREYHRRHRVCEKHSKTPIVLIGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFLSGYKGPRILHFGSPQMYDNPFVRSMWPATAKAGAEPVMISYDQNSLLRSFANIEHQQDKQLPLFGFNSSKEGHCNETVSGIPMRQATAGAIGPSASANGGRKLASDCKPGSLDSNCALYLLSTLQTQSQELSLVQSTVNCPVQSSPLEDLHFDAGDKYSSCSESPQEKSTNPLLVVDANTTNLHCDHMIHMRPDEIVENGDLATFPFFWE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0743 372 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 14 316 IPR044817 GO:0003677
Alju01g0743 372 SUPERFAMILY SBT domain 73 154 IPR036893 GO:0003677|GO:0005634
Alju01g0743 372 Pfam SBP domain 75 148 IPR004333 GO:0003677
Alju01g0743 372 Gene3D - 66 136 IPR036893 GO:0003677|GO:0005634
Alju01g0743 372 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
Alju01g0743 372 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Alju01g0743 372 MobiDBLite consensus disorder prediction 29 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0743 Alju-ChrAlju01 5529348 5531131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0743 68 173 SBP-box Gene Family AT5G50670 66.038 1.75e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Alju01g0743 SBP 1e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0743 01 5529348 5531131 Alju01g0743 01 5529348 5531131 ECH