Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0736 ATGAGTAATAGTAATTTTGTTTTCTCATGGAGCAGACCACGGTTGCAAATTGTAGTGTGCTGCTTCACTGTCGATTCAGCAAGTACTGAAGAAGCATCGACCATGGCGATGGATGTGGAGGAGAAACTAGAATCAGGGTTCCCGTACTGGAAAGCCATCCGTCGCCATTTCGGCCCGGACGCTCCTTTCTTTGCTTCCGGTAATATCGAACGGGAACTTCTTGCTAAACAGGTTGCCTTGGAATTAACTGCCGAAGAGAAGCAACAGCTTTTAATAGGAGATGAATACAGGAAAGTCTTCTGTTCCATTGCTGGTTGTGGAGCACGCTTGACTTCCTTGGAGGAATTTGAGAGTCATTATAATGCAAGGCATACTGCCTCTTGTTCAGTGTGTTCTAGAGTCTACCCAACATCTCGCCTGCTAAGCATACATGTTTCTGAAGTGCATGATTCCTTCTTTCAAGCAAAGGCTGCTCGTGGCTATGATGTGTATGAATGCTTAGTGGAAGGCTGTGGTTTAAAGTTTAAAAGTTACAAGAGTAGGCAGCAGCATCTGATTGACAAGCATAAGTTCCCCACTTCATTTGAGTTTTTTGAGAAGGCGCGACCATCAAAGAAACAAAGGCAGAAGATTCAACGGAAACAAGCTACAGACAAGGAGAATGATACAAGAACAATGGAAGTGGATAATGCAACCATGGATGGCCTTGTAACGGCTGTCTCTAAGTTGAGTACTTCGGACTCGACTCCATCATCGGTCAGCTTTGGTCGCCGGCACACTCGTGGTTTGACATTTGTCCCTAGAGCTGTTCAGCGTGAAGTTGGATCAAATTCTGCATCACCTAGAAGGAAGCAGTAA 858 0.451 MSNSNFVFSWSRPRLQIVVCCFTVDSASTEEASTMAMDVEEKLESGFPYWKAIRRHFGPDAPFFASGNIERELLAKQVALELTAEEKQQLLIGDEYRKVFCSIAGCGARLTSLEEFESHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKAARGYDVYECLVEGCGLKFKSYKSRQQHLIDKHKFPTSFEFFEKARPSKKQRQKIQRKQATDKENDTRTMEVDNATMDGLVTAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVQREVGSNSASPRRKQ 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0736 285 ProSitePatterns Zinc finger C2H2 type domain signature. 128 149 IPR013087 -
Alju01g0736 285 MobiDBLite consensus disorder prediction 242 258 - -
Alju01g0736 285 ProSitePatterns Zinc finger C2H2 type domain signature. 101 124 IPR013087 -
Alju01g0736 285 PANTHER UNCHARACTERIZED 44 273 IPR039258 -
Alju01g0736 285 SMART c2h2final6 164 189 IPR013087 -
Alju01g0736 285 SMART c2h2final6 99 124 IPR013087 -
Alju01g0736 285 SMART c2h2final6 126 149 IPR013087 -
Alju01g0736 285 MobiDBLite consensus disorder prediction 201 226 - -
Alju01g0736 285 ProSitePatterns Zinc finger C2H2 type domain signature. 166 189 IPR013087 -
Alju01g0736 285 MobiDBLite consensus disorder prediction 242 285 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0736 32 280 C2H2 Transcription Factor Family AT5G14140 64.479 1.44e-117 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju01g0736 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0736 01 5486593 5489579 Alju01g0736 01 5486593 5489579 ECH