Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0726 ATGACAGATATGACTCCAACGTTGACCATGACGACCAAAAAGAAAACATTGTCTGTGTGGAGCACTGGAAGTAGCTATGAGGGGAGCAAGACAAGAGCTATAGAGAACAGGGGAAGTGGTTGTTCATCAGGCGATGAACCTCAGGATGCAGATTATGATATGCCGTCTCTGAGCGACGAGCTAGAGACTCTGATCTTGGCCAGACTTCCAAGATCTGAGCATTGGAAACTATGCTTTCTCAACAAGAGGCTTCAAGCCCTTGTGAAGAGTGGTGAAATCATCAAAATCAGGAGAGAAATAGGGTTCAAAGAGCCCACTGTGTTCATGTTAGCAAGTGGAGACACCAATTGGTGGGTCTTCGATGAACATTTCGAATCCTGCAAGATGCTTCCCTTTATCCCATCAGATTACAATTTCACACATGGAGATAAGGAATCATTCTGTGCAGGCTCCCATTTGTTTGTTTCAGGCAGGGAATTCGATGGAGCTGCTATTTGGAAGTACGAGGTAGCAACAAACCAATGGTTCAAGGCTCCCTCCATGATCAATCCTAGGTGTCTGTTCGCATCAGCCACCTTCGGCAACTATGCTTTCGTCGCAGGAGGTCAAGACACCAAAACTTACTCTCAAGTTTTGGACTCTGCTGAGAAATACAATTCAAAGAACAAGTGTTGGGAATCTCTTCCTAGGATGAATCGGAAGAGAAAGTCTTGCTCGGGTTGTTACATGGACAAGAAATTCTATGTGATTGGGGGACAAGATGAGCAACAGAACGTTCTCACTTGTGGAGAATTCTTTGACGAGGAAACCAACACTTGGGACTTGATTCCCGACATATTGAAAGACATTCCTGTGTCTGTTTCACGGTCCCCACCACTTGTTGCTGTCGCCAATAATCAACTTTACGCGCTTGATGCCTCCTCCAACGAGCTGAAAACGTATCTGAAGCGAAGCAACTCATGGAAGAAGCTGGGAACAGTACCAGTGATAGCTAGTGCTCAAGGAGGTTGGGGTGTGGCGTTTAAATCTCTGGGGAACGAGCTTCTCGTGATCGGTGCAGCTGCTACATCTTCTTCTGGTCGTGGCTTGACCATCTACACTTGTTGCCCTGATCCTTCTGCTGAGGAGCTTCAATGGCGGCGAATTGAATGTGGCAACACCAAGCTTAGTCCCTTCATTCACAATTGTGCTCAAAAGAGGAAGAAAATGGCGGGAGAGGAGCCGCTCAAGCAAAGCACATCTTTAAGCCCGTATTCTGCTACTACTTCCCCTTCTCCTTCTCTTCCAGGGATAAAGGATGATCCGAACCAAAAATGCTGGAGGAAGCAAGCGGACGAGAATCTCAAGAGGCTTCACTCTCTTCTCTTCGGGGCAGATCTTGCCCTTCAGAAAGATGATTTTGAGTCGGCGTACATCCTCGGGCTTCAACTCATCGGCTTTCTCGACTCCCACTGCCACTCCGATGTTGATGAAGCTTATATACGTCCAATTCGACGCGAAGTCTTGGGGAAAATTGACACCGCTCGTCGAGCCCTCATTCCAGACTCTGATTGCCAAGCGTTTGAACAAGCAAAAAAATCTCCAGGGTGTATTTTTGGCAAAACAGGAGATATTGACATTGGGAAGATTAAAAAGTCGAAGTACTTCCAAGCTCTTCTCAAGGAATCCAAAGAAAAGGGTTATCATCTGGAGAAGCAAGACAAAGCAGGTAGCAAAATGGCAAAAGAATTGCTGCAAACCAAGTTAACATCAATGTATGGGAGAAGTACATTGAGGGCTAATAGTAGTTCCAAATTGAGTTTCAAACATAACAGATCTGAGGACTTCATGATTGTTGAAAAGCCTATGTCACATGGTGGCCACAGTAAGGATCATCCTGTCTCTTCTTTCTTGAAAACTGAAGGGGAAGAAAGAACTTCTGGAACTTTGGGAAAAAAGCGTGTGCACTTGGAAACTAATAGCCCCCAAGTTAGCAACGTGAAGTCACCTTCAAGCAATGAGGAAGCGAAGTCTGATTTTGTTACTGCCAGAGCTAAATTGGAAATGGAAACAAGGCAGAGGCGAGAAGGGATTGGTTCACCCACTGCATCTGTCTCACAATATGATATCAATACTTCGAATCGGGTATATGGTGGGAGATCATATGGTGTTTCACGACGTGGCGTCCGTGGTAATTTTGTGCCTCCTATTAAATCCAAAGGAACTGGCGATGGAAATATGACGTCAAGAATTTCTGGAAAGTGTGATGATACTTTAGATGACTCAACAAAGAGATGTTTGGAAGGGCTATCTGGTCCTGACGGAGAGCTTCCTGAGAAATTGAGGAATATAGAACCACGCCTTATTGAACATGTTAGCAATGAGATTATGGATAGAGATCCTAATGTCCGGTGGGACGACATTGCGGGATTGGAACATGCCAAGAAATGTGTCACTGAGATGGTTATATGGCCTCTGCTACGACCTGATATATTCAAGGGATGCCGCTCTCCTGGGCGAGGTCTACTTTTATTTGGTCCACCAGGAACTGGTAAAACAATGATAGGAAAAGCCATAGCAGGGGAGGCAAAGGCAACCTTCTTTTACATCTCGGCAAGTTCATTGACAAGCAAGTGGATCGGAGAAGGTGAAAAACTAGTGAGAGCCCTCTTTGGAGTTGCCAGTTGTCGCCAGCCGGCTGTAATATTTGTGGATGAAATAGATTCTCTCCTATCTCAGCGCAAGTCAGAGGGTGAACACGAATCAAGCAGAAGGCTAAAGACACAATTTCTCATTGAGATGGAAGGTTTTGACAGTGGTAACGAGCAGGTTCTTCTTATAGGGGCCACCAACCGTCCTCAAGAGCTTGATGAAGCAGCACGAAGGCGACTTACCAAAAGACTTTATATCCCCCTGCCATCCTCAGAGGCAAGAGCCTGGATCATACGTAACCTCCTGGAAAAAGACGGACTATTCATGCTGACAAAGGAAGAGATTGATACCATATGCAACAAAACGAAAGGATATTCGGGATCAGACATGAAAAATTTAGTGAAGGATGCTTCAATGGGTCCCCTAAGAGAGGCTTTAAAGCAGGGCATTGAAATTACCAAGTTGGACCAGGAAGATATGCGGCCAGTAGCTCTTCAGGACTTTATGGATGCTCTAAAAGAGGTGAGGCGATCTGTTTCCTCAAATGAACTGGGCGCTTATGAAAAATGGAACGAACAATTTGGAAGCCTATCATCGGAGAAGGTGGAGTCATTTGTATGA 3252 0.4536 MTDMTPTLTMTTKKKTLSVWSTGSSYEGSKTRAIENRGSGCSSGDEPQDADYDMPSLSDELETLILARLPRSEHWKLCFLNKRLQALVKSGEIIKIRREIGFKEPTVFMLASGDTNWWVFDEHFESCKMLPFIPSDYNFTHGDKESFCAGSHLFVSGREFDGAAIWKYEVATNQWFKAPSMINPRCLFASATFGNYAFVAGGQDTKTYSQVLDSAEKYNSKNKCWESLPRMNRKRKSCSGCYMDKKFYVIGGQDEQQNVLTCGEFFDEETNTWDLIPDILKDIPVSVSRSPPLVAVANNQLYALDASSNELKTYLKRSNSWKKLGTVPVIASAQGGWGVAFKSLGNELLVIGAAATSSSGRGLTIYTCCPDPSAEELQWRRIECGNTKLSPFIHNCAQKRKKMAGEEPLKQSTSLSPYSATTSPSPSLPGIKDDPNQKCWRKQADENLKRLHSLLFGADLALQKDDFESAYILGLQLIGFLDSHCHSDVDEAYIRPIRREVLGKIDTARRALIPDSDCQAFEQAKKSPGCIFGKTGDIDIGKIKKSKYFQALLKESKEKGYHLEKQDKAGSKMAKELLQTKLTSMYGRSTLRANSSSKLSFKHNRSEDFMIVEKPMSHGGHSKDHPVSSFLKTEGEERTSGTLGKKRVHLETNSPQVSNVKSPSSNEEAKSDFVTARAKLEMETRQRREGIGSPTASVSQYDINTSNRVYGGRSYGVSRRGVRGNFVPPIKSKGTGDGNMTSRISGKCDDTLDDSTKRCLEGLSGPDGELPEKLRNIEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGNEQVLLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIRNLLEKDGLFMLTKEEIDTICNKTKGYSGSDMKNLVKDASMGPLREALKQGIEITKLDQEDMRPVALQDFMDALKEVRRSVSSNELGAYEKWNEQFGSLSSEKVESFV 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0726 1083 Gene3D - 966 1052 - -
Alju01g0726 1083 FunFam F-box/kelch-repeat protein SKIP11 99 384 - -
Alju01g0726 1083 FunFam Fidgetin like 1 966 1052 - -
Alju01g0726 1083 Gene3D - 794 1068 IPR027417 -
Alju01g0726 1083 PANTHER AAA DOMAIN-CONTAINING 584 1073 - -
Alju01g0726 1083 SMART kelc_smart 152 195 IPR006652 GO:0005515
Alju01g0726 1083 SMART kelc_smart 246 299 IPR006652 GO:0005515
Alju01g0726 1083 SMART kelc_smart 196 245 IPR006652 GO:0005515
Alju01g0726 1083 MobiDBLite consensus disorder prediction 652 671 - -
Alju01g0726 1083 Pfam ATPase family associated with various cellular activities (AAA) 835 965 IPR003959 GO:0005524|GO:0016887
Alju01g0726 1083 MobiDBLite consensus disorder prediction 616 645 - -
Alju01g0726 1083 SMART AAA_5 831 967 IPR003593 GO:0016887
Alju01g0726 1083 MobiDBLite consensus disorder prediction 721 744 - -
Alju01g0726 1083 MobiDBLite consensus disorder prediction 403 436 - -
Alju01g0726 1083 Pfam Vps4 C terminal oligomerisation domain 1037 1072 IPR015415 -
Alju01g0726 1083 MobiDBLite consensus disorder prediction 409 430 - -
Alju01g0726 1083 Gene3D - 111 384 IPR015915 GO:0005515
Alju01g0726 1083 FunFam Fidgetin-like 1 794 976 - -
Alju01g0726 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 794 1071 IPR027417 -
Alju01g0726 1083 MobiDBLite consensus disorder prediction 616 646 - -
Alju01g0726 1083 Pfam Kelch motif 235 277 IPR006652 GO:0005515
Alju01g0726 1083 Pfam Kelch motif 184 232 IPR006652 GO:0005515
Alju01g0726 1083 SUPERFAMILY Kelch motif 115 376 IPR015915 GO:0005515
Alju01g0726 1083 ProSitePatterns AAA-protein family signature. 937 956 IPR003960 GO:0005524|GO:0016887
Alju01g0726 1083 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0726 Alju-ChrAlju01 5421622 5429757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0726 772 1074 Calmodulin-binding Proteins AT3G56690 33.333 1.95e-40 160