Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0718 ATGATCACTAAGCTTCCTCTCCACCTGAGAGCGTTAACCTTTTTGTTCTTTTGCCTCTTTGTCATTTCGCTCGGAGAAGAGCTTATCAGTTGCAACACAACATCCCCAGATGTTTCTGGCTACAGTTGCAGTAAAAATGAATCACAATGTGGAACATTTGCAGTTTTCTTCACGAATTCATACTACTCATCTCTCTACAACTTGAGCTTTTACTTGGGGCTCAATCCTTATGTGATTGCAGATGCAAATGGGTTTTCTGCAGAAACAAAGTTTCTTCTTCATGACCAACCTTTACTAATACCAATAGACTGCAAATGCAAAGGTGGCTTCTTTGGCGCTGAAATAACCAAAACTACCATTAAAGGTGAGAGCTTTTATGGCATTGCTCAATCGCTTGAAGGCTTAACAACCTGCATGGCTATTAGTGATAAGAATCCAGGTGTGTCACCTTGGGATCTAGCTGATGACATCAGATTGCTGATTCCTCTGAGATGTGCATGTCCCTTATCACCTAAAGTTTCTCCAAAGCCGAAGCTTCTGATTTCTTACCCTGTGATAGAAGGTGATACAGTTCACAATTTGGCATCAAAGTTTAATACTACAGCTGAAGCAATAATCTCCGCAAATAACTTGTTCTCCAAAGATTTTAAACCTGAGAAGCTCAAACCCTTTACCTCTCTTCTGATCCCACTCATTGGTAAACCTGTTCTTGGTTCTCTGGCTAAACCCAAAGAACCCGGTTCAGGTAATCGATCAAGCAGCATTACAGTAATTAAATCATCACCACACAGGAAGCCAAAAACGTGGAAGGCTGAATTGTACATTGGCCTAGCTGGGGTTGCAGTTGGAATTGTGTTTGCTTTTCTAGCAGTTTTTGTTGTGGTTCGATTGAGGAACGAGAAGAAAGAGAAATCATCATCAGCCAAAAGAAACAATTTGGAGCTGCAACATCTTAATATAAGCGTAAGAACCACCAGCGAGAAGAAAGTTTCGTTCGAGGGGTCACAGTATGGGAAAATCATCCACACAACACCTCCTAAGATGCAGCTGGAGACATACACTATTGAAGACCTCATAAAAGCAACGGATGATTTCAGTTCAAGTAATCTCATTGAAGGATCTGTATTTCATGGCCGTTTAGAAGGGAAGAACATGGCAATCAAACAAACAAACACAGAAACAGTTTTGAAAATCGATATTGGGCTCTTCCACAACTCGATCCACCATCACCCCAACATTCTCAGGATGCTTGGAACGTGTTTAACAGAAGGTCCAGAGTCATATCTGGTTTTCGAGTACGCAAAAAATGGGTCTTTAAAAGACTGGCTTCATGGTGGTTTAGCCATAAAGAACGAGTTCATATCATCCTGCTATTGCTTTCTCACATGGAGTCAGAGGCTCGGAATCTGCCTCGACGTGGCCATGGCCCTTCAATATACGCACCACGTCATGAAGCCAAGCTATGTCCATAGAAACATAAAGAGCAGGAACATATTTCTGGATGAAGAATTTGGTGCCAAGATTGGGAATTTTGGGATGGCAAGTTGTGTTGAGAACGACACAGAGGATCCAAAGTTCTATTCAACCAACCCTGCTTCTTGGAATCTTGGTTATCTGGCACCAGAATATGCACACCAAGGTGTGATTTCTCCAAGTACTGATATTTTTGCTTATGGGGTGGTTTTGCTGGAGATTTTGTCTGGTCAGACACCTATAAGCAGACCCAATGAGAAGGGAGAAGGAAGTGTTTGGCTCACTGATAAAATAAAGTCTGTTTTGGAGTCAGGAAATGAGGAAGAACTTAGAGGGTGGATGGACAAGGCATTGGGTGAGAATTATTCATTGGATGCAGCAGTAACAATGGCGAATATTGCTAGGGCTTGCGTGGAGGAAGATTATAGTATGAGGCCAAGTGCAGGGGAAGTTGTGGAGAAGCTAACCATATTGATCGAGGAACTTGCAGAAGAAAAGTTCTTGCAAGCCTCTGGTTAA 1992 0.4217 MITKLPLHLRALTFLFFCLFVISLGEELISCNTTSPDVSGYSCSKNESQCGTFAVFFTNSYYSSLYNLSFYLGLNPYVIADANGFSAETKFLLHDQPLLIPIDCKCKGGFFGAEITKTTIKGESFYGIAQSLEGLTTCMAISDKNPGVSPWDLADDIRLLIPLRCACPLSPKVSPKPKLLISYPVIEGDTVHNLASKFNTTAEAIISANNLFSKDFKPEKLKPFTSLLIPLIGKPVLGSLAKPKEPGSGNRSSSITVIKSSPHRKPKTWKAELYIGLAGVAVGIVFAFLAVFVVVRLRNEKKEKSSSAKRNNLELQHLNISVRTTSEKKVSFEGSQYGKIIHTTPPKMQLETYTIEDLIKATDDFSSSNLIEGSVFHGRLEGKNMAIKQTNTETVLKIDIGLFHNSIHHHPNILRMLGTCLTEGPESYLVFEYAKNGSLKDWLHGGLAIKNEFISSCYCFLTWSQRLGICLDVAMALQYTHHVMKPSYVHRNIKSRNIFLDEEFGAKIGNFGMASCVENDTEDPKFYSTNPASWNLGYLAPEYAHQGVISPSTDIFAYGVVLLEILSGQTPISRPNEKGEGSVWLTDKIKSVLESGNEEELRGWMDKALGENYSLDAAVTMANIARACVEEDYSMRPSAGEVVEKLTILIEELAEEKFLQASG 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0718 663 Gene3D Phosphorylase Kinase; domain 1 339 433 - -
Alju01g0718 663 SUPERFAMILY Protein kinase-like (PK-like) 341 647 IPR011009 -
Alju01g0718 663 MobiDBLite consensus disorder prediction 242 261 - -
Alju01g0718 663 Pfam Protein tyrosine and serine/threonine kinase 399 646 IPR001245 GO:0004672|GO:0006468
Alju01g0718 663 MobiDBLite consensus disorder prediction 246 261 - -
Alju01g0718 663 Gene3D Transferase(Phosphotransferase) domain 1 434 660 - -
Alju01g0718 663 ProSiteProfiles LysM domain profile. 181 229 IPR018392 -
Alju01g0718 663 Gene3D LysM domain 170 235 IPR036779 -
Alju01g0718 663 ProSiteProfiles Protein kinase domain profile. 326 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0718 663 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 25 651 - -
Alju01g0718 663 SMART LysM_2 182 230 IPR018392 -
Alju01g0718 663 CDD LysM 181 229 IPR018392 -
Alju01g0718 663 FunFam PTI1-like tyrosine-protein kinase 3 434 658 - -
Alju01g0718 663 Pfam LysM domain 183 230 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0718 Alju-ChrAlju01 5342545 5344536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0718 40 650 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.566 2.25e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju01g0718 PK_Tyr_Ser-Thr 1.2e-30 CL0016