LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g0694	ATGCCAAGTGTAGCTGTGAAGCTCTACAGCGTGTTCTTCAAATTTCTTTGGAAGCAACGTTTGCAGAGTCGGATTCAAGCTGCGCCCGATGAAGCCGACCCATTCGGTGTCACCTCAAGACCCGATGAATCCGTTGCCGCCTCCAATCCTTCCTTCACCGACGGTGTTGCCACCAAGGACATCCATATTGACCCCTTCACATCTCTTACTATAAGAATCTTCCTTCCCGAAACCGCACTAAGGTCCCCTGAATCGGATTCTGTGGCCCAACCCAGACCTAGGCCTAGACTTAGCAACGAGAAAGCAGATCTTGCATCTCGATCTGCGCAAGTTTATAGTACTAATCGCAATTCAGATTCTCATCCCTTGCGGCCTAATAATCATGGTAAAAGCAATGGTGTGGAAGGGTTAAATTTGGCCGGCGGTGGGGTGTACAGAGGTTACTCGCCGGTACTAAATAATCGTCGGAGACTTCCGGTAATGTTGCAGTTTCATGGTGGTGGTTGGGTTAGTGGAAGCAACGATTCTGTTGCAAACGACTATTCCTGTCGGCGAATTGCCAAACTCTGCGATGTGATCCTTATTGCTGTGGGGTACAGGCTCGCTCCTGAAAATCGTTATCCGGCAGCTTTTGAGGACGGAATGAAGGCATTGAATTGGCTAGCAAAGCAGGCAAACTTAGCTGAATACAACAAATCGATGGGGATTGGTCGAGGTGGTGGGATTGAGCTCAAAAAATCAGATGCCCATAGGCATATTGTGGACACTTTTGGAGCTTCAGCAGTTGAGCCATGGTTGGCCGCTCATGGAGATCCTTCAAGGTGTGTTCTTCTTGGGGTCAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGCTGTGGAAGCAGGCAAGCTTCTGGACCCTGTCAAGGTGGTGGCACAAGTCCTCATGTATCCCTTCTTTATAGGAAGTGTACCTACTCATTCGGAAATAAAGTTGGCAAACTCCTACTTTTATGACAAGTCTATGTGTATGCTTGCATGGAAACTATTCCTGCCTGATGAAGAATTTAGCCTGGATCACCCTGCTGCTAATCCCCTTGTTGCAAACCGGGGGCCTTCTCTTGAGCTTATGCCTCCAACATTGACAGTGGTTGCAGAACATGACTGGATGAGGGATCGTGCCATTGCTTACTCGGAGGAGCTTCGAAAGGTAATTGTCGATGCACCCGTTCTTGAATACAAGGATGCAGTACATGAATTTGCAACGGTTGACATACTTCTAAAAAGCCCTCAGGCTCAGGTTTGTGCTGAGGACATTGCCATCTGGGTTAAGAAATACATTTCACTTCGAGGCCATGAATTCTCATATTAG	1359	0.4768	MPSVAVKLYSVFFKFLWKQRLQSRIQAAPDEADPFGVTSRPDESVAASNPSFTDGVATKDIHIDPFTSLTIRIFLPETALRSPESDSVAQPRPRPRLSNEKADLASRSAQVYSTNRNSDSHPLRPNNHGKSNGVEGLNLAGGGVYRGYSPVLNNRRRLPVMLQFHGGGWVSGSNDSVANDYSCRRIAKLCDVILIAVGYRLAPENRYPAAFEDGMKALNWLAKQANLAEYNKSMGIGRGGGIELKKSDAHRHIVDTFGASAVEPWLAAHGDPSRCVLLGVSCGANIADYVARKAVEAGKLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKSMCMLAWKLFLPDEEFSLDHPAANPLVANRGPSLELMPPTLTVVAEHDWMRDRAIAYSEELRKVIVDAPVLEYKDAVHEFATVDILLKSPQAQVCAEDIAIWVKKYISLRGHEFSY	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g0694	452	Pfam	alpha/beta hydrolase fold	161	417	IPR013094	GO:0016787
	Alju01g0694	452	SUPERFAMILY	alpha/beta-Hydrolases	52	443	IPR029058	-
	Alju01g0694	452	MobiDBLite	consensus disorder prediction	103	133	-	-
	Alju01g0694	452	Gene3D	alpha/beta hydrolase	35	447	IPR029058	-
	Alju01g0694	452	MobiDBLite	consensus disorder prediction	30	51	-	-
	Alju01g0694	452	PANTHER	ARYLACETAMIDE DEACETYLASE	44	417	-	-
	Alju01g0694	452	MobiDBLite	consensus disorder prediction	82	134	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g0694	Alju-ChrAlju01	5184669	5187243	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g0694	1	452	Carbohydrate Esterase	AT3G27320	71.711	0.0	653