Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0693 ATGGTGAACGGAGAACAAAGACGCAGCCCGGAGAACCAAAACAACCCATCAATAGAAACAAGGTCATCGGAAAATGGCGACAACTTGGGCGGATTGTTCAGCCCCAAATTCAAATCTGCTGCTGCTTTGGCCGGTTGGGATGAGGAGTCCCTGCTATTCGCCAGCCTCGTCGTCCAAGACACTCCCGATAGAGTTTTAAAGAATGATAAACACTTTGATCTTAACATCAAGACTCCGACCTCCAATTCAAGAAGGAAACGCAGAGCTCAGAGGAGTCCGCTTCCAATCCCTGTTACTGTTCTTGACCTTGACCAAGATGAAACTCCCAGAAAGGATAATGCAAAGAAGATGAAAGGAAACAGAACTAGTGCTGACGAAGCGGGGGGGAATATTTTGACCCAGCACAACTCTGGTTCTTCTTCTTCTGGATCTGCTTTTCCCTGTATCGATAAACTCAGGGAGGAGCTTTCCTGCGCGATTTGTCTGGAGATATGCTTTGAACCAAGTACTACTCCTTGTGGGCACAGCTTTTGCAGAAAATGCCTTCGATCTGCAGCGGATAAATGTGGAAGAAAGTGCCCAAAGTGCAGACAACTGATTAGTAATGGACGATCTTGCAACGTGAACACAGTTCTTTGGAATACAATACAGCTCCTTTTTCCCAAGGAAGTGGAAGCAAGGAAAGTAGCAGGTGCCTTGAATATACGAGAAGCTCAGCAGCGCACGAATCCAGAAACAGCATTCTATAACAACCTAAGGATTTCAACGTTTGAGGCACCAAGCAGAAGTACAAGAAGTCAGAGGAGAAGAGTAGTGATCACAACAACAACCCAAGATGAGGATGAAGATGCTGCATTGGCAAGAAGGTTGCAGAGAGAGGAAAATGGGTTGGTTCAGAATAATAATAATAATTCAAGGAACCTGACTCCATCATCGTCATCGTCTTCTTCTTCAAGAGGGATGTCAAGAAGAAGGATAACGAGCCAAGACGAGGATGCTGCTTTGGCTCTGAGGTTGCAGAGGGAAGAGTTTATGCAGGCTTTCAGGGGAAGCCAAGCACGTTCGGAAACAAGTGGGTCGATGTCGATGTCTTCAGCCAGAGCAAATTTGAGGGCCATGGCTTCTAGGGCAATCAATCTTCGAATTAGAGACCGAAGATTATGA 1164 0.4605 MVNGEQRRSPENQNNPSIETRSSENGDNLGGLFSPKFKSAAALAGWDEESLLFASLVVQDTPDRVLKNDKHFDLNIKTPTSNSRRKRRAQRSPLPIPVTVLDLDQDETPRKDNAKKMKGNRTSADEAGGNILTQHNSGSSSSGSAFPCIDKLREELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGRKCPKCRQLISNGRSCNVNTVLWNTIQLLFPKEVEARKVAGALNIREAQQRTNPETAFYNNLRISTFEAPSRSTRSQRRRVVITTTTQDEDEDAALARRLQREENGLVQNNNNNSRNLTPSSSSSSSSRGMSRRRITSQDEDAALALRLQREEFMQAFRGSQARSETSGSMSMSSARANLRAMASRAINLRIRDRRL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0693 387 MobiDBLite consensus disorder prediction 274 290 - -
Alju01g0693 387 SMART ring_2 158 196 IPR001841 -
Alju01g0693 387 MobiDBLite consensus disorder prediction 104 122 - -
Alju01g0693 387 MobiDBLite consensus disorder prediction 1 32 - -
Alju01g0693 387 MobiDBLite consensus disorder prediction 1 29 - -
Alju01g0693 387 MobiDBLite consensus disorder prediction 259 328 - -
Alju01g0693 387 MobiDBLite consensus disorder prediction 294 323 - -
Alju01g0693 387 MobiDBLite consensus disorder prediction 126 143 - -
Alju01g0693 387 Pfam Zinc finger, C3HC4 type (RING finger) 158 196 IPR018957 GO:0046872
Alju01g0693 387 SUPERFAMILY RING/U-box 150 221 - -
Alju01g0693 387 ProSiteProfiles Zinc finger RING-type profile. 158 197 IPR001841 -
Alju01g0693 387 ProSitePatterns Zinc finger RING-type signature. 173 182 IPR017907 -
Alju01g0693 387 MobiDBLite consensus disorder prediction 74 143 - -
Alju01g0693 387 PANTHER UNCHARACTERIZED 326 379 - -
Alju01g0693 387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 227 IPR013083 -
Alju01g0693 387 MobiDBLite consensus disorder prediction 259 273 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0693 150 259 C2H2 Transcription Factor Family AT5G39550 32.456 2.09e-06 47.8