Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0691 ATGGGAAGGCAGCCTTGTTGTGATAAGGTTGGCCTGAAACGAGGCCCTTGGACTATTGAGGAAGATCACAAGCTCATCAACTTCATCCTCAACAATGGCATCCACTGTTGGCGCATGGTTCCCAAGCTTGCTGGTCTGCTAAGATGTGGCAAGAGCTGCAGATTGAGGTGGATTAATTATCTGAGGCCTGACCTCAAGAGAGGTGGCTTCACTGAGACGGAAGAGGATCAAATTATTCAGCTACATTCTCGTCTTGGTAACAGGTGGTCTAAGATTGCTGCACATTTTCCTGGGAGGACAGACAATGAGATCAAGAACCATTGGAACACGAGGATCAAGAAGAAGATGAAGCTCATGGGTCTGGACCCTGTGACCCACATGCCGCTTGATCAAATGCAAAAGGAAGTCACTAATAATAATAAGAAACAGAGAGACCAGTCAAAGCTCAGTTCTGAAGAAAATGTGGAGATGGCCATCAAGTCCTCCGACAGTAGTGTCTGCAGCACACAAGTTGTTTCATCAGTTTCAGAAGAACAAGGGAACAAGGTCTGTGATCTTCCCAACAAAAACGACTTGGGCTTGGAGTCATGGATGTTGAACCAAGAGAAGAACACCAGTACTGCTAGCTCTTCATCTTTTTCTCTGGAAGATTCTAGCCACCTTTCCATGAGTGAATCTTCTTACCTGCAGGAAAACTCTTTAATGGAATGGGTTGACAGTATTAGTATGGAATCCATTCTCCAATGGGATGGCTTCGATCCTCTGGATCAGGATCTTCTCTACTTTGCAAATAGATAA 798 0.4499 MGRQPCCDKVGLKRGPWTIEEDHKLINFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTETEEDQIIQLHSRLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKKMKLMGLDPVTHMPLDQMQKEVTNNNKKQRDQSKLSSEENVEMAIKSSDSSVCSTQVVSSVSEEQGNKVCDLPNKNDLGLESWMLNQEKNTSTASSSSFSLEDSSHLSMSESSYLQENSLMEWVDSISMESILQWDGFDPLDQDLLYFANR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0691 265 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju01g0691 265 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Alju01g0691 265 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju01g0691 265 CDD SANT 16 61 IPR001005 -
Alju01g0691 265 MobiDBLite consensus disorder prediction 137 151 - -
Alju01g0691 265 FunFam MYB transcription factor 68 129 - -
Alju01g0691 265 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 214 - -
Alju01g0691 265 FunFam MYB transcription factor 11 67 - -
Alju01g0691 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju01g0691 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju01g0691 265 CDD SANT 70 110 IPR001005 -
Alju01g0691 265 Gene3D - 11 67 - -
Alju01g0691 265 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Alju01g0691 265 Gene3D - 69 116 - -
Alju01g0691 265 SMART sant 66 114 IPR001005 -
Alju01g0691 265 SMART sant 13 63 IPR001005 -
Alju01g0691 265 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju01g0691 265 MobiDBLite consensus disorder prediction 135 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0691 Alju-ChrAlju01 5165008 5165989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0691 1 166 MYB Transcription Factor Family AT5G16600 62.570 8.21e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g0691 Myb_DNA-binding 1.8e-11 CL0123