Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0683 ATGTGTCACAGCAACACTCCTCCTCCGCCTTCTTCTCCTCCCGATCTCACTCACACTAACTCCGATTCTATTCTCACAACCACAGATTCCCTGAGTCGTCTTGCAACACCTCGCCGTAAGAACAGAACAAAAACCAGGAAGCCCAAGTTCCTGAGTCTTCGTCTCCAGCTTTCATCAAACCAATCTGATCCAATGACACCTCATCAACAGCTCAATCTCTTCCCCTTACATCCTGAAAACTTGATCCATGACAAAGATGTCATGCACGACGACCACAACGTCGCTTTCCTCTTCACTTCCCATGGCCCCGCCACCCTCAACGACCTTCTCGAACAGGACTCCCCCACCACCACCACCACCACCAACACCACCGTGTCGGAGGAGGATTCTATGTCGCCACAGTGTTTGACGGCGTGCCCCTTCGACGAGGACAACGGGAGCTCCCTGGTACGGAAGGCCATGAAGAGGAGGAACGAAGAGGAGGATAGGGACGGAAGGGAGGAGAGGTGGGTGTGTTACTCGGAGGTCACAAGCTATTGCAGCGCCACTACGGCGGAGAGCACCGCCGCTACCACGGCGTCGTTTGGGTTACTGTCCTTGAAGCTGGATTATGAGGGTATATTAAATGCTTGGTCTGATAAAGGTCCTCTTTATGTTCCGGGTGAGACCCCACAAGCTGTCCCCGATTTCTTGGATCATCTCCTTCTCCGCCATCCGCCCCATGTTGATCAGAGTGAGAAGAAGATGGGACAAAGGGAAGCAAGCGTGTTAAGATACAAAGAGAAGAGACAAAGCAGGCTCTTCTCCAAGCGAATCCGCTACGAGGTTCGTAAACTCAATGCGCAACAGCGTCCCAGGATGAAGGGACGATTTGTGAAAAAGGACTGA 888 0.5248 MCHSNTPPPPSSPPDLTHTNSDSILTTTDSLSRLATPRRKNRTKTRKPKFLSLRLQLSSNQSDPMTPHQQLNLFPLHPENLIHDKDVMHDDHNVAFLFTSHGPATLNDLLEQDSPTTTTTTNTTVSEEDSMSPQCLTACPFDEDNGSSLVRKAMKRRNEEEDRDGREERWVCYSEVTSYCSATTAESTAATTASFGLLSLKLDYEGILNAWSDKGPLYVPGETPQAVPDFLDHLLLRHPPHVDQSEKKMGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAQQRPRMKGRFVKKD 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0683 295 Pfam CCT motif 252 294 IPR010402 GO:0005515
Alju01g0683 295 MobiDBLite consensus disorder prediction 1 15 - -
Alju01g0683 295 MobiDBLite consensus disorder prediction 1 22 - -
Alju01g0683 295 MobiDBLite consensus disorder prediction 111 133 - -
Alju01g0683 295 ProSiteProfiles CCT domain profile. 252 294 IPR010402 GO:0005515
Alju01g0683 295 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 2 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0683 Alju-ChrAlju01 5117050 5118711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0683 198 294 C2C2-CO-like Transcription Factor Family AT1G73870 44.828 1.44e-22 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju01g0683 CCT 2.1e-18 CL0281