Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0648 ATGGAGAAACAGGTCGTGGAAAACCTATGGAAGGGTGAGAGAGAAGCTCAGATTGAAGCAGCAAGGGAGCTCACTAGATTAAGCAGCAAGCAGAGACACAAATTGGCTGAAAATGGAATAATGGTTCCTCTGATTTCTATGCTTCACTCTCAAGACCACGAAGCCATTGAAGCTTCTCTCTGTGCTCTGCTCTGTCTTGCCTTTGGCAGTGAACGAAACAAGATTCGGATCATCAAGTCTGGAGCTTTACCAGTGTTGTCGAATCTCCTTCAATGCCAAAGCCAACCATTGGTAGAACTAACAATAGCTGCAATGTTAACTCTTTCTTCTTGCAAAGCTAATAAGCTAGCAATAGCTTCATCTGGGGCAATCCAATTACTAGTACAAATTCTCAATGGCCATTATGAAAATTGCACAAAGACACAATCCCAGCTAGACGCCATAGCGACACTCCACAACCTCTCGACCTGTCAAGAGATAACACCTCTGCTAGTCTCTTCTGGTATAACGATGTCCTTACTTGAACTGATTCACAACTCAGGGAAATCAAGTGAGATAGCTGAGAAATCAATTGGGTTGCTGGAAAACATTGTGTATTCATCAGAAAGAGCATTAAGCGAGGCTGCTAGTATAGGAGGAGCCATAAGAATAGTGGTTGAGACTATTGAAGAAGGTTCCATGATAGGGAAAGAACATGCTGTGGGAATATTGCTTCTGATATGTAAGAGTTGCAGAGAGAAATACAGAGGAATGATACTGAGAGAAGGAGTGATGCCTGGTTTGCTTCAGTTAAGTGTGGATGGGACCCAGAGAGCTAAAGGGATGGCTAGAGAATTGTTGTTGCTTTTGAGGGATTGTTCTAATTATGGTTCTTCAACAAGTGGTAAGAATATGAAGATGAATCATGTGATTATAGAACAGGTAATGCAGGAGATTGATGAGGAAGGTGAGGAATTGGCTGGGAGTACTTTGAGATTGGTGGAGGAGATGATTGCCAAGCTCCATACATGA 1011 0.4253 MEKQVVENLWKGEREAQIEAARELTRLSSKQRHKLAENGIMVPLISMLHSQDHEAIEASLCALLCLAFGSERNKIRIIKSGALPVLSNLLQCQSQPLVELTIAAMLTLSSCKANKLAIASSGAIQLLVQILNGHYENCTKTQSQLDAIATLHNLSTCQEITPLLVSSGITMSLLELIHNSGKSSEIAEKSIGLLENIVYSSERALSEAASIGGAIRIVVETIEEGSMIGKEHAVGILLLICKSCREKYRGMILREGVMPGLLQLSVDGTQRAKGMARELLLLLRDCSNYGSSTSGKNMKMNHVIIEQVMQEIDEEGEELAGSTLRLVEEMIAKLHT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0648 336 FunFam U-box domain-containing protein 4 3 201 - -
Alju01g0648 336 SMART arm_5 111 156 IPR000225 GO:0005515
Alju01g0648 336 SMART arm_5 70 110 IPR000225 GO:0005515
Alju01g0648 336 SMART arm_5 157 199 IPR000225 GO:0005515
Alju01g0648 336 SMART arm_5 28 68 IPR000225 GO:0005515
Alju01g0648 336 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Alju01g0648 336 FunFam U-box domain-containing protein 4 205 325 - -
Alju01g0648 336 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 168 212 IPR000225 GO:0005515
Alju01g0648 336 PANTHER U BOX DOMAIN-CONTAINING 4 286 - -
Alju01g0648 336 SUPERFAMILY ARM repeat 5 283 IPR016024 -
Alju01g0648 336 Gene3D - 3 333 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0648 Alju-ChrAlju01 4887885 4889377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0648 18 285 U-box Gene Family AT1G24330 33.213 1.69e-27 111