Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0646 ATGTCGATGGAGTCACCTGCCAATGGAGCCGAGTCTATATCAGAGGTTCAGAATTCGGTTTCTGCACAAGATCACGACCCTCCTTCAACATCTGAAACTCCAAAACCTTCTTCTCGGCCTCCCTTAAGAGCATCATCAAGAAATCTCACTGGACATCCTAATTATGGAATCAAGATCCACCAAAAGCTTCCTTACGAGGAAACCAACCATGTGCAGGATCAAGAACTACCAAATACGGCCAAGCAACATCACAATTCTAGTGGAAAACCAGCAGAAATCAGTTCAGAGAAGAATATATCAGTATCAGAACCATCTAAAGGAGTTCTTGATCCAACAAAGAGTTGCTCTCAGTCAGATGTAACTTTTTGTGCAAGTCCTCAGAATAGCTTCTATTCTGCGGCTACCTATTCAGAAGCCAAACAAAGTTTCGCCAATACTGAAGCCAGTGAGTGTGTTAGTGTGGATAAGTCAGGTGAAAGTGGTGAAGCGACTAATTCTTGTGACTTCAATGAGAGCAGGAAGACCAGCATCTGTAGAGGGAGTACTGGGAGTGATGTGAGTGATGAGAGTAGTACCAGTAGTTTGAGCAGTGCTTTGTATAAACCTCACAAGGCTAATGATATAAGATGGGAAGCGATTCAAGCTGTAAGAGCTCGTGATGGGGTGCTGGAGATGAGGCATTTCAGGTTGTTGAAGCAATTGGGATGTGGGGACATAGGAAGCGTGCATCTTGCAGAGTTGAGCGGCATGAGGACATGTTTTGCGATGAAGATAATGAACAAAACAGAGCTGGCCAGTAGGAAGAAGCTTCTGAGGGCTCAGACAGAAAGAGAGATCTTGCAGTCTCTGGATCACCCTTTTTTGCCCACATTATATACACATTTTGAGACAGAGACGTTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCGCTGAGGCAAAGACAGCCTAGGAAGTATTTCTCGGAGCATGCCGCCAGGTTTTATGTAGCAGAAGTTCTTCTTGCTTTGGAATACCTTCACATGCTTGGGATCATCTACAGAGACCTCAAACCAGAGAACGTGTTGGTGCGAGAAGACGGTCACATAATGCTCTCAGACTTCGACCTCTCTCTGCGTTGCGCCGTGAGTCCAACTCTTGTAAAATCCTCGAACTCAACCCTAGACGGAAGATCTTCTAGATACTGCATTCAACCAACCTGCATCGAACCGACCTGCGTGATTCAGCCAGATTGCATCCAACCCTCCTGTTTCACCCCTCGATTTCTAACAGGCAAATCCAAGAAAGACAAAAAGCCCAAACCAAAGAACGAAACGCCTCACCAGGTAACTCCTCTGCCGGAGCTCATCGCCGAACCCACAAACGCCCGTTCCATGTCCTTCGTAGGCACACACGAATACTTAGCACCCGAAATCATCAAAGGCGAAGGCCATGGAAGTGCCGTAGACTGGTGGACGTTCGGGATATTCTTGTACGAGCTTTTGTTCGGAAGAACGCCGTTCAAAGGGTCGGCGAACAGAGCGACTCTGTTCAACGTGGTTGGGCAGCCATTGAGGTTTCCAGAATCACCGACCGTTAGCTTCGCTGCTAGGGATTTGATCAGAGGATTGCTCGTGAAAGAGCCTCAACATCGTCTGGCTTATAGACGAGGAGCGACGGAGATCAAACAGCATCCATTCTTTCAGAACGTGAATTGGGCGCTGATACGGTGTGCGAACCCTCCGGAGGTTCCCAGGATGGCGGCCCTGAAAGAGATGGCGGCGGCTCAGAAAGTGCCTGGCGTTAAGTCTGCCGGTAACTATTTAGATATTGATTTCTTTTGA 1836 0.4766 MSMESPANGAESISEVQNSVSAQDHDPPSTSETPKPSSRPPLRASSRNLTGHPNYGIKIHQKLPYEETNHVQDQELPNTAKQHHNSSGKPAEISSEKNISVSEPSKGVLDPTKSCSQSDVTFCASPQNSFYSAATYSEAKQSFANTEASECVSVDKSGESGEATNSCDFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAVRARDGVLEMRHFRLLKQLGCGDIGSVHLAELSGMRTCFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLDGRSSRYCIQPTCIEPTCVIQPDCIQPSCFTPRFLTGKSKKDKKPKPKNETPHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRMAALKEMAAAQKVPGVKSAGNYLDIDFF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0646 611 Gene3D Transferase(Phosphotransferase) domain 1 459 583 - -
Alju01g0646 611 MobiDBLite consensus disorder prediction 174 193 - -
Alju01g0646 611 FunFam Serine/threonine-protein kinase D6PK-like 226 311 - -
Alju01g0646 611 PANTHER FLIPPASE KINASE 1-RELATED 74 586 - -
Alju01g0646 611 SMART serkin_6 228 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0646 611 SUPERFAMILY Protein kinase-like (PK-like) 206 583 IPR011009 -
Alju01g0646 611 ProSiteProfiles Protein kinase domain profile. 228 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0646 611 FunFam serine/threonine-protein kinase D6PK-like 312 379 - -
Alju01g0646 611 Gene3D Phosphorylase Kinase; domain 1 226 311 - -
Alju01g0646 611 MobiDBLite consensus disorder prediction 71 112 - -
Alju01g0646 611 MobiDBLite consensus disorder prediction 1 112 - -
Alju01g0646 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Alju01g0646 611 Gene3D Transferase(Phosphotransferase) domain 1 312 379 - -
Alju01g0646 611 MobiDBLite consensus disorder prediction 1 52 - -
Alju01g0646 611 FunFam serine/threonine-protein kinase D6PK-like 460 583 - -
Alju01g0646 611 CDD STKc_phototropin_like 226 583 - -
Alju01g0646 611 Pfam Protein kinase domain 229 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0646 611 Pfam Protein kinase domain 462 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0646 Alju-ChrAlju01 4874943 4877771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0646 136 611 AGC Kinase Gene Family AT5G47750 71.341 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju01g0646 Pkinase 3.3e-36 CL0016