Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0633 ATGGCTTCTTCTTCGAGCTACTCAAATTCGCCATGTGCAGCGTGCAAGTTTCTGAGGAGGAAATGCATGCCAGATTGCATATTCGCGCCATATTTTCCACCAGAGGAACCTCAAAAGTTTGCAAATGTTCACAAAATATTCGGAGCCAGCAACGTAAGCAAGCTGCTAAACGAGGTGCAACCACATCAGAGAGAGGATGCTGTGAACTCTCTGGCTTATGAAGCAGAAGCGAGGATTAAGGATCCAGTGTATGGGTGTGTAGGGGCTATTTCTGTGCTCCAGAGGCAAGTCATTAGGCTTCAGAAAGAACTTGATGCCACTAATGCTGATCTCATTCGCTATACCTGCAATAATAATAATAATGATGACTTGCCTGGTCAAGGTTCTGCAAATCAAGGAGGTGGTGGTTCTAGTTCTACGTCTCTCGGTCAACAATCTCCTTCTGACTATTATTATCCTTCTCCTTGGAATAATTACTAA 480 0.4396 MASSSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNNNNNDDLPGQGSANQGGGGSSSTSLGQQSPSDYYYPSPWNNY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0633 159 Coils Coil 90 110 - -
Alju01g0633 159 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Alju01g0633 159 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 129 - -
Alju01g0633 159 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Alju01g0633 159 MobiDBLite consensus disorder prediction 122 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0633 Alju-ChrAlju01 4757197 4757676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0633 5 114 AS2 family AT3G27650 85.455 2.00e-70 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju01g0633 LOB 8.1e-43 No_clan