Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0615 ATGAAACCTTCTTCTTCATGCCTCCTCTTCATTCCCATCTCTCTCCTCTTTCTCTCCCTCCCTCCCTCCCTTCTCTCCGATCCTCGAATCTCCCCAGCCGGCCTCTTTTGCGGCACCTCCAAAGCCCCTCTCTCTTCCCATTACATCCCCATCTTCGTCCAAGAAATGCAGTCTCTCTCTCAAACCATCACCTCTCAGAATTGGGCTTCTCACTCTCTCAACCTCTCTCCCCTTCCCATCTTCGGCTTCGCTCAGTGCTTCCATGACCTCTCCCACACCGATTGCCTCCTCTGCTACGCCGCCAGCCGCACCAAGCTCCCTCGCTGTCTTCCCTCTCTCTCCGCCCGCATCTACCTCGACGGCTGCTTCCTTCGCTACGATAACTACAGTTTCTACTCCGAAACCATTGATGCCGTTCGGGACACTGTGAACTGTAGCTCCGGATATGGTGTGGCAGAGGATGAAGGCGGCGAGAGGCGGGAATTTGAGAAGAACGTTGGCGAGGTGGTTGATAATGTGGTTAGGGTTTCTGTGGGAGAGGGGTTAGGGTTTGGTGTGGAAGAGGTTGGGGGAGTTTATGCTTTGGCTCAGTGTTGGAAGACACTGCGGAGCGATGAATGTGGAATTTGCTTGAGGAAAGCAGCGAGGGAGGTGAGAGGGTGCTTGCCTAACAGGGAAGGAAGGGCACTGATTGCTGGTTGCTATTTGAGGTACTCAACTCACAAGTTCTACAACCAAGCAGGTCAAGAAGAAAAGGATCAAAAGAGGTCATTTAGGAAGGGAGCCATTATAGCAACAGTGTTATCTGTGGCTGCAGTTGCGATGCTGTTTCTCTCCGCCTCTTATGTAATCTTCTCAAGATTATCAAAGATGAATAAAGGGAGCAATCATCTTGGTCAGATTTCCATTTCCATAAACAAGTCAAGCTTGAATTTCAAATATGAAACTCTGGAGAAGGCTACAGATTATTTCAACCCTTCAAGAAAAATTGGGCAAGGAGGGGCTGGCTCTGTGTTCAAAGGGACTCTCCCAAACGGCGAAGTCGTGGCTGTCAAGAGATTAGTGTATAATACGAGGCAATGGGTTGACGAGTTCTTTAACGAAGTGAATTTGATTAGCGGAATTGATCACAAGAACCTCGTCAAACTCTTGGGTTGTAGCATTGAAGGCCCCGAGAGCCTCCTCGTCTACGAGTACCAACCCAACAAGAGCTTGGATCAATTCATTTTTGAAAAGAACAAAAGTCAGATTCTCAATTGGAAGCAGCGTTTTGATATAACACTTGGAATAGCAGAGGGGCTTGCGTATCTTCATGCAGGATCTAACATAAGAATAATCCATAGAGACATTAAAAGTAGCAACATTCTTCTGGACGAGAATCTCACTCCTAAGATTGCCGACTTCGGCCTCGCCCGCTGTTTTGCCGCCGACAAAACTCATCTCAGCACCGGAATCGCCGGAACACTAGGATACATGGCACCTGAGTATCTTGTTCGGGGCCAACTAACGGACAAAGCTGATGTTTATAGCTATGGAGTGCTTGTTCTGGAAATTTTATGTGGCAGAAGGAACAATGTCTTCAGAGAAGATTCTGGTTCCCTTCTACAAACAATTTGGAAACTGTATCGATCAAATCGATTGCATGAAGCTGTGGATCCGTGCTTAGGAGATGATTTTCCAGCAGCAGAGCTATCAAGGGTGCTTCAAATAGGCCTGCTCTGCACACAAGCTTCTGCTTCCCTGAGGCCAACCATGGAAGAAGTTGTTGAGCTGTTAAGTAACTCACATGTGGATGTTTGTGTACCAAATCAACCGCCTTTTTTGAGTACTGGCGCTGCGTTGCTAAACTCACAGAGCTCCATTAGGTCTTACAGCACAAACAGTTTTGTTTCAAATGCATTGAAGAAGATTGGGATGTCCGAAGTATCATCATCGGAGACCTTCAGCACTCGCAGCTCCGAGGGACCATCAAGAAGTGAAGAACCGATAAACCAAGCTTGA 2001 0.4768 MKPSSSCLLFIPISLLFLSLPPSLLSDPRISPAGLFCGTSKAPLSSHYIPIFVQEMQSLSQTITSQNWASHSLNLSPLPIFGFAQCFHDLSHTDCLLCYAASRTKLPRCLPSLSARIYLDGCFLRYDNYSFYSETIDAVRDTVNCSSGYGVAEDEGGERREFEKNVGEVVDNVVRVSVGEGLGFGVEEVGGVYALAQCWKTLRSDECGICLRKAAREVRGCLPNREGRALIAGCYLRYSTHKFYNQAGQEEKDQKRSFRKGAIIATVLSVAAVAMLFLSASYVIFSRLSKMNKGSNHLGQISISINKSSLNFKYETLEKATDYFNPSRKIGQGGAGSVFKGTLPNGEVVAVKRLVYNTRQWVDEFFNEVNLISGIDHKNLVKLLGCSIEGPESLLVYEYQPNKSLDQFIFEKNKSQILNWKQRFDITLGIAEGLAYLHAGSNIRIIHRDIKSSNILLDENLTPKIADFGLARCFAADKTHLSTGIAGTLGYMAPEYLVRGQLTDKADVYSYGVLVLEILCGRRNNVFREDSGSLLQTIWKLYRSNRLHEAVDPCLGDDFPAAELSRVLQIGLLCTQASASLRPTMEEVVELLSNSHVDVCVPNQPPFLSTGAALLNSQSSIRSYSTNSFVSNALKKIGMSEVSSSETFSTRSSEGPSRSEEPINQA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0615 666 Coils Coil 664 666 - -
Alju01g0615 666 CDD STKc_IRAK 330 592 - -
Alju01g0615 666 Pfam Salt stress response/antifungal 158 240 IPR002902 -
Alju01g0615 666 Pfam Salt stress response/antifungal 51 129 IPR002902 -
Alju01g0615 666 Pfam Protein tyrosine and serine/threonine kinase 327 592 IPR001245 GO:0004672|GO:0006468
Alju01g0615 666 MobiDBLite consensus disorder prediction 640 666 - -
Alju01g0615 666 FunFam Cysteine-rich receptor-like protein kinase 2 289 399 - -
Alju01g0615 666 Gene3D - 34 131 IPR038408 -
Alju01g0615 666 Gene3D - 150 243 IPR038408 -
Alju01g0615 666 ProSiteProfiles Protein kinase domain profile. 324 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0615 666 Gene3D Transferase(Phosphotransferase) domain 1 401 600 - -
Alju01g0615 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Alju01g0615 666 FunFam Cysteine-rich receptor-like protein kinase 2 400 599 - -
Alju01g0615 666 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 623 - -
Alju01g0615 666 ProSiteProfiles Gnk2-homologous domain profile. 144 243 IPR002902 -
Alju01g0615 666 ProSiteProfiles Gnk2-homologous domain profile. 30 131 IPR002902 -
Alju01g0615 666 FunFam Cysteine-rich receptor-like protein kinase 3 146 243 - -
Alju01g0615 666 Gene3D Phosphorylase Kinase; domain 1 285 399 - -
Alju01g0615 666 FunFam Cysteine-rich receptor-like protein kinase 2 31 131 - -
Alju01g0615 666 SMART serkin_6 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0615 666 SUPERFAMILY Protein kinase-like (PK-like) 309 622 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0615 Alju-ChrAlju01 4566944 4569564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0615 2 489 Receptor kinase-like Gene Family AT5G40380 56.442 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju01g0615 PK_Tyr_Ser-Thr 4.7e-45 CL0016