Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0602 ATGGACAAGAAACCGTACAGTTCATCGTCGTCATCTCAGGACCCAGAAGTGAGAAAAGGGCCTTGGACCATGGAAGAAGACTTGATCTTGATCAACTATATAGCAAATCACGGTGAAGGTGTCTGGAACTCCTTGGCTAAAGCTGCTGGTCTTAAGCGAACCGGGAAGAGTTGTCGGCTCCGGTGGCTAAATTACCTTCGTCCTGATGTTAGAAGAGGGAATATTACACCAGAGGAACAGCTTTTGATCATGGAGCTTCATGCAAAGTGGGGAAACAGGTGGTCAAAGATTGCGAAGCATCTACCAGGAAGAACTGATAACGAGATTAAGAACTATTGGAGGACTAGGATTCAGAAGCACATTAAGCAGGCTGAGAGTAGCTGCTCCCAGTCGCAGCAACATCAACAACACGCGCCGCTAAGTTCTGAGACGGCAGATCATCAGCAAGCCACCACCAGCCACGTGTCCTACACCATGGCTGATTCTCAGCCGATGGATACCTACTCTCCCTCCTCCTTTAATCATCAAGCGGCTCTCACTGACCATCAGCCCTTCCCCACCCATCCCTTCCCCACCGTACTGGATCAGTCCTCCATTAACTACTGGAGCATGGAGGATCTCTGGTCTAATATGCAAATACTTAACGGCGATTAA 654 0.4893 MDKKPYSSSSSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAESSCSQSQQHQQHAPLSSETADHQQATTSHVSYTMADSQPMDTYSPSSFNHQAALTDHQPFPTHPFPTVLDQSSINYWSMEDLWSNMQILNGD 217
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0602 217 FunFam Myb transcription factor 19 71 - -
Alju01g0602 217 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Alju01g0602 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Alju01g0602 217 Gene3D - 19 71 - -
Alju01g0602 217 MobiDBLite consensus disorder prediction 123 153 - -
Alju01g0602 217 Gene3D - 76 148 - -
Alju01g0602 217 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Alju01g0602 217 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 174 IPR044676 GO:0003700|GO:0006355|GO:0043565
Alju01g0602 217 SUPERFAMILY Homeodomain-like 16 113 IPR009057 -
Alju01g0602 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Alju01g0602 217 CDD SANT 76 115 IPR001005 -
Alju01g0602 217 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Alju01g0602 217 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Alju01g0602 217 FunFam Myb-related protein 305 76 155 - -
Alju01g0602 217 CDD SANT 21 66 IPR001005 -
Alju01g0602 217 SMART sant 71 119 IPR001005 -
Alju01g0602 217 SMART sant 18 68 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju01g0602 Alju-ChrAlju01 4452750 4456045 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0602 4 217 MYB Transcription Factor Family AT3G01530 56.075 3.38e-78 231
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g0602 Myb_DNA-binding 7.5e-15 CL0123