Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0580 ATGGACAGCAGAATCGAGTACCCAGAAACTCACAGGAACAAGTGTGCAGCGTGCTTCAGGCAGTTCAACAAGTTGGAGCACCTAGTGGAACACATGAGGATCTCATATCATTCGGTTCACGAACCCACCTGTGGCATTTGTGGCAAACACTGCAGATCATTTGAGTCTCTAAGGGAACACCTTATCGGTCCATTACCAAAGCAGGAGTGCAGAGATATTTTTGCGAACCGAGGATGCAGGTTTTGCTTGAAGGTCCTTGACAGCCCTTACTCTCGAAGGATCCACCAAGAAAGATGCCAACTTTCTGCAAATACGGGACTAATTGGACGTTTTGCAAACCTGGGGATTCGTGATAATTTGACTATTGGGAAAGGGCCGCAAGTAGTTGCACTTGCTTGCAAAATGGTGGGAGGTGGCAGTGACGGCTCACTTGATCTCTGTGCAAGAGTCTGCATAATTGATGAGCAAGAAAACATCTTATTCCATGCTTACGTGAAGCCTCCAATTCCTGTCACCAACTACAGGTATGAGACAACAGGGATTCGACCAGAATACTTGAGGGACGCAATGACGACGAGGCAAGTGCAGAGGAAGATTCAAGACTTCCTCTGCAACGGAGAACCCATGTGGAAGATTCGACCCAAGTGTGGGAGAGCCAGGATTCTTGTAGGTCATGGGCTAGATCATGACCTCGAGTCTCTCCAAGTGGAATATCGGTCAGAAATGATGAGGGACACTGAGAAATACCCTCCATTGATGAAGACGAGCAAGCTGAGCAACTCACTCAAGTACTTGACACAAGCATATCTTGGGTATGAGATCCAGACGGGGATACAGGACCCATATGAGGATTGTGTGGCAACGATGAGGCTGTACATGAGGATGAAGTCCCAAGCACACAAGAAAGAGGAATACCCTTTGGCTTCAGATCCTCAAAATAAGAACAACTTCGCGTCATGGAGGCAAAGAGAGTTAGAGAGAATGAGCCCAGATCAAATGCTTGCAATCTCCAGGTCTGACTATTACTGCTGGTGCCTCGATTCCGTCTAG 1050 0.4752 MDSRIEYPETHRNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICGKHCRSFESLREHLIGPLPKQECRDIFANRGCRFCLKVLDSPYSRRIHQERCQLSANTGLIGRFANLGIRDNLTIGKGPQVVALACKMVGGGSDGSLDLCARVCIIDEQENILFHAYVKPPIPVTNYRYETTGIRPEYLRDAMTTRQVQRKIQDFLCNGEPMWKIRPKCGRARILVGHGLDHDLESLQVEYRSEMMRDTEKYPPLMKTSKLSNSLKYLTQAYLGYEIQTGIQDPYEDCVATMRLYMRMKSQAHKKEEYPLASDPQNKNNFASWRQRELERMSPDQMLAISRSDYYCWCLDSV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0580 349 ProSitePatterns Zinc finger C2H2 type domain signature. 15 37 IPR013087 -
Alju01g0580 349 FunFam RNA exonuclease 4 124 311 - -
Alju01g0580 349 Gene3D - 125 315 IPR036397 GO:0003676
Alju01g0580 349 CDD REX4_like 129 292 IPR037431 GO:0006364|GO:0008408
Alju01g0580 349 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 42 IPR013087 -
Alju01g0580 349 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 18 347 IPR047021 GO:0004527
Alju01g0580 349 SUPERFAMILY Ribonuclease H-like 141 299 IPR012337 -
Alju01g0580 349 SMART exoiiiendus 127 301 IPR013520 -
Alju01g0580 349 Pfam Exonuclease 146 291 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0580 Alju-ChrAlju01 4301168 4302832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0580 3 349 C2H2 Transcription Factor Family AT3G27970 75.284 0.0 568