Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0564 ATGAGCAGCAAGAGAGGTGCTTCAATATCTTATTATACAGATTACTTGTGCTCTCCTTTCCCTTACCCATCACACATTCTTGTAATTTCAGATATATGGCTTTTTACTGGAGCTATTACAGCAGTTTTATCAATAATAACTATAACTGCATACATCTTGCTTCGTAAACTTTCCAAATCAGCCAACCCCAGAAATGAAGCAACATCGGGGGAAGTTCTGTTGAACTTGAAGGACAATGCCTGTCCAAGAGTTCCTCTGAAGGAAATCTACTCCGCCACAAACCATCTAAATGAAATGAATGTCATTGGTGAAGGAACTTTTGGGAAGGTTTATAAAGGCACAATGACAAATAATCAACATGTTGCAATAAAACATGTCATTAATGATGATGGAAACATGGAGACTTTTGTCAGAGAAATTTCAAACTTATCACATGTTAGACATCCAAATCTGGTCGCTTTGTTGGGTTGTTGTGTCGAGGGAGATGAATGTTTCCTTGTCTATGAACTGTGCCCCAATGGGAGCTTATCAGAGTGGCTATTTGGCAAGAACAAGGTTCTGTCCTGGATGCAGAGGCTTAATATTGCAATTGACACTGCAAAAGGTCTTTGGTTCCTTCATACATACTCACAAGGCTGCATCGTTCACCGTGATGTCAAGCCAACAAACATTCTCCTGGGGCCGAAGTTTGAAGCAAAGCTATCAGATTTTGGACTCTCTAAAGTTTTAGAGGTGGGTGAATCATATGTTAGCTCAGAAGTGAGAGGAACTTTTGGATATGTTGATCCTGAGTACCAAAGCAACCGCCGTGTAAACTCATCTGGGGATGTCTACAGCTTTGGCATGGTACTTCTGCAGATCCTCTCTGGGAAGAAGGCTATAAATTTGAAACTCAAGAAACCCATGACTCTGAATAAAATGGCAAAAGCACTCATACGGGATGGGAGCATAAAAGAATTCGTTGATCCTAAGCTTCAAGGAGAGTACTTAGAAGAAGCATTTGATTTTACCCTTCATCTTGCTTTATCATGCACAGCCCTTAACCAACAACGTCCATCCATGGAGCTGGTTGTCAGAAGATTGGAGGAGGCCCTACTAATTTCAATGAAGAAGGTTTCTGCAACAGACACTTCAGTGGACATTTCTTCAATTCTATGA 1158 0.4076 MSSKRGASISYYTDYLCSPFPYPSHILVISDIWLFTGAITAVLSIITITAYILLRKLSKSANPRNEATSGEVLLNLKDNACPRVPLKEIYSATNHLNEMNVIGEGTFGKVYKGTMTNNQHVAIKHVINDDGNMETFVREISNLSHVRHPNLVALLGCCVEGDECFLVYELCPNGSLSEWLFGKNKVLSWMQRLNIAIDTAKGLWFLHTYSQGCIVHRDVKPTNILLGPKFEAKLSDFGLSKVLEVGESYVSSEVRGTFGYVDPEYQSNRRVNSSGDVYSFGMVLLQILSGKKAINLKLKKPMTLNKMAKALIRDGSIKEFVDPKLQGEYLEEAFDFTLHLALSCTALNQQRPSMELVVRRLEEALLISMKKVSATDTSVDISSIL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0564 385 Pfam Protein kinase domain 98 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0564 385 SMART serkin_6 96 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g0564 385 Gene3D Phosphorylase Kinase; domain 1 57 170 - -
Alju01g0564 385 FunFam probable receptor-like protein kinase At5g59700 171 380 - -
Alju01g0564 385 Gene3D Transferase(Phosphotransferase) domain 1 171 381 - -
Alju01g0564 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Alju01g0564 385 SUPERFAMILY Protein kinase-like (PK-like) 79 361 IPR011009 -
Alju01g0564 385 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Alju01g0564 385 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 33 363 - -
Alju01g0564 385 ProSiteProfiles Protein kinase domain profile. 96 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0564 Alju-ChrAlju01 4193622 4195294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0564 86 362 Receptor kinase-like Gene Family AT1G07650 43.158 3.45e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Alju01g0564 Pkinase 1.1e-43 CL0016