Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0563 ATGGCTACTCGCCTTCTGCGTTCTGTCGCTTCTTCTTCCTCTGCTTCCAGACGTTGCTTGGGTCTACCTCGTTGGTGGATGAGAGGTATCAGTGGAATTCACGAATCTGCTGCTGCTGCTGAGGAGCCTATTACCCCACCCGTCCAAGTAGATCACACTCAGCTTCTCGTTGATGGACAATTTGTTGATGCTGCTTCTGAAAAAACTTTCCCAACCTTCGATCCTAGGACAGGAGACGTAATTGCCTATGTTGCTGAAGGTGACCGCCAAGATGTGGATCGTGCTGTCTCTGCTGCCAGGAGGGCCTTTGATGAGGGACCATGGCCAAAGATGACAGCTTACGAAAGGTCACGCATAATGCTGCGTTTTGCTGATTTACTGGAAAAGCACAATGATGAAGTTGCAGCACTTGAAACATGGAACAATGGAAAGCCTTATGAGCAGGCTGCGAATGTTGAAGTGCCTATGGTGACGCGTATATTTCGATATTATGCTGGCTGGGCAGATAAAATTCATGGCCTCACAGTTCCATCTGATGGACCCCACCATGTCCAAACCTTGCATGAGCCCATTGGCGTAGCTGGCCAGATTATTCCTTGGAATTTCCCTCTTCTTATATATTCATGGAAGGTCGGGCCTGCTTTAGCCTGTGGTAATACCGTTGTTCTCAAAACTGCAGAACAGACACCTCTCTCTGCTCTCTTTGTCTCAAAGCTATTTCATGAGGCTGGACTTCCTCCTGGGGTTCTAAATATTATATCTGGCTATGGTCCCACCGCTGGTGCAGCTCTATGCAGCCACATGGGTGTTGACAAGCTTGCTTTCACAGGATCCAGTAGCACGGGCAAGATTGTGATGGGACTATCTGCACAAAGTAATTTGAAACCAGTGACTCTGGAGCTGGGTGGAAAGTCTCCCTTCATTGTGTGCAAGGATGCTAACATTGATGAGGCTGTTGAGACTGCACATTCTGCTTTGTTCTTTAATCAGGGTCAATGTTGTTGCGCCGGTTCTCGTACATTTGTACATGAAAGCATATATGATGAGTTTGTGGAAAAAGCAAAAGCCCGTGCTCTCAACCGTATTGTTGGAGATCCTTTTAAAAGAGGGGTTGAGCAAGGTCCTCAGATTGATTCAACACAATTCGAGAAGATCCTCAGGTACATTAAATCAGGCATTGATAGTGGAGCTACTCTTGAATCTGGCGGTCAAAGAATTGGCTCAAAAGGTTACTACATCCAACCTACTGTTTTCTCAAACGTCCAGGACAACATGCTGATAGCAAACGATGAAATCTTTGGACCAGTGCAGACTATCTTGAAATTCAAGGATCTTGAGGACGTAATAAAAAGAGCAAATGCAACATCCTATGGGCTGGCTGCTGGAGTTTTCACTTCTAATTTGGACACTGCCAACACATTGATGCGCGCATTGCGAGTGGGAACGGTGTGGATAAACTGCTACGATGTGTTTGATGCAGCAATACCTTTTGGTGGGTATAAGATGAGTGGGCAAGGCAGAGTAAGGGGAATCTATAGCCTTAGCAGTTACCTGCAAATTAAGGCTGCTGTTACTTCTTTGAAAAATCCAGCTTGGTTGTAG 1602 0.4613 MATRLLRSVASSSSASRRCLGLPRWWMRGISGIHESAAAAEEPITPPVQVDHTQLLVDGQFVDAASEKTFPTFDPRTGDVIAYVAEGDRQDVDRAVSAARRAFDEGPWPKMTAYERSRIMLRFADLLEKHNDEVAALETWNNGKPYEQAANVEVPMVTRIFRYYAGWADKIHGLTVPSDGPHHVQTLHEPIGVAGQIIPWNFPLLIYSWKVGPALACGNTVVLKTAEQTPLSALFVSKLFHEAGLPPGVLNIISGYGPTAGAALCSHMGVDKLAFTGSSSTGKIVMGLSAQSNLKPVTLELGGKSPFIVCKDANIDEAVETAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALNRIVGDPFKRGVEQGPQIDSTQFEKILRYIKSGIDSGATLESGGQRIGSKGYYIQPTVFSNVQDNMLIANDEIFGPVQTILKFKDLEDVIKRANATSYGLAAGVFTSNLDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLSSYLQIKAAVTSLKNPAWL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0563 533 SUPERFAMILY ALDH-like 50 526 IPR016161 GO:0016491
Alju01g0563 533 Pfam Aldehyde dehydrogenase family 61 522 IPR015590 GO:0016491
Alju01g0563 533 CDD ALDH_F2BC 50 525 - -
Alju01g0563 533 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Alju01g0563 533 FunFam Mitochondrial aldehyde dehydrogenase 2 305 494 - -
Alju01g0563 533 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 299 306 IPR029510 GO:0016491
Alju01g0563 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Alju01g0563 533 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 38 522 - -
Alju01g0563 533 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 57 327 - -
Alju01g0563 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 522 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0563 Alju-ChrAlju01 4190118 4193287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0563 1 533 Aldehyde Dehydrogenase Gene Family AT3G48000 72.420 0.0 835