Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0554 ATGTCACAAGGTTTCGCTATCGAGCTCTACTTCGATCCGGCGCTTGAAAACCAAGTGTTGAAGGCCTGGAATGTACTGGCTCGCCGACAAATCAGCACCCATCTCATCGAAATCGAATCTCGCCCGCACATCACACTCTATTCCAGCCCCTTTGTTGATTCCGCCAAGCTTGAATCAGTTGTCAAGAGTTTCGCTGCCAAGCAAGAACCTTTGCCTCTATCTTTCTCTACAATCGGGTGTTTACCAAACGACAATAATGTACTCTTTCTTTCACCGACCCCTTCAATCTGGCTGCTTCAGTTCCAATCGCAGTTGTGCGATGCAATGAAGAAAGAAGGTTTCGAGATAGGAGAGGATTATCGCCCAGATTCTTGGATTCCTTATTGCGCTGTTGCTCAGGAAGTGCCAAAAATTAGGATGGCCGAGGCGGTTTGTGTCTTGCGGGACTTGAAATTGCCGGTTTCTGGGTATGCCATGGATATCGGGCTGGTGGAGTTATCTCCCGCTCGCGAGCTCTTCTCATTTGTGCTTGGTAATTCATTAAGATCTGTGAGGATGCCTTGTCCTTTGCCATTATACTCCTCACGGCAATGAGAGCATGTTTGCACTGCATCTTCAGTTGATACTGCTTCACAAACGCAATTGATATTGCTTCAGTTTAGGATGTTTGATGAATGGCCTAGTAAAGCTGTGAAATAG 699 0.4664 MSQGFAIELYFDPALENQVLKAWNVLARRQISTHLIEIESRPHITLYSSPFVDSAKLESVVKSFAAKQEPLPLSFSTIGCLPNDNNVLFLSPTPSIWLLQFQSQLCDAMKKEGFEIGEDYRPDSWIPYCAVAQEVPKIRMAEAVCVLRDLKLPVSGYAMDIGLVELSPARELFSFVLGNSLRSVRMPCPLPLYSSRQXEHVCTASSVDTASQTQLILLQFRMFDEWPSKAVK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0554 232 SUPERFAMILY LigT-like 5 133 IPR009097 -
Alju01g0554 232 Gene3D Cyclic phosphodiesterase 5 178 - -
Alju01g0554 232 PANTHER - 1 181 - -
Alju01g0554 232 Pfam 2'-5' RNA ligase superfamily 41 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0554 Alju-ChrAlju01 4135979 4138079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0554 1 183 Calmodulin-binding Proteins AT5G40190 72.131 1.93e-91 265