Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0551 ATGCATGTGTCGGGAGGTGAGGAGTGGAAACAGAGGCGGCACATGTGGCCAGTCCCTGCCACCGCGACGACTGTAGCTCCCGCAGCCGATTCTTCATCATCCGAATTCATATGCAAAGATGGACGCAAGATCCGTGTTGGTGATTGTGCACTTTTCAAGCCACCCCAAGATTCCCCACCTTTTATAGGAATAATTCGCAAATTAACATTGAAGAAAGAAGAAAGTCCGAGTTTAGAAGTGAATTGGCTTTACCGACCTGCTGATCTGAAGCTTGCAAAAGGGATCCAATTGGAAGCTGCGCCAAACGAGGTCTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTATCTGTAGACGAGTGTATGACATTGAGAGTGAGCGTTTATGGTGGCTAACTGATAAAGACTACATTAATGTACGACAAGAAGAAGTTGACCAGCTATTAGATAAAACAAGACTAGAAATGCATGGGGCAGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCGACATCAACACCTTCACTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTCTTCTTTTGGTTCACAGGGCAAGGGAAAGAAGAGAGAACGGGGTGATCAGGGATCTGATTCATCTAAAAGGGAACGGTTGATCAAAACAGAAGATGGTGATACTGGTCAGCATAGGCCAGAAAACATGTTAAAGTCTGAGATTGCTAAAATTACTGAGAACGGTGGTCTTGTTGACTTTGAGGGAGTTGAAAGACTGGTACAGCTTATGCAACCTGACAGTGCTGATAGAAAGATAGATTTGGCTGGGCGAATAATGCTTGCTGATGTAATTGCAGTCACAGATCGGTTTGATTGTCTTGGAAGCTTTGTACAGCTCAGGGGCCTACGTGTATTGGATGAATGGCTCCAAGAGGTCCATAAGGGGAAAATTGGTGATGGTAATACGCCTAAAGAAAGTGACAAGTCTGTTGAAGAATTACTGTTGGCTCTACTTCGTGCATTGGATAAGCTCCCAGTGAACCTTCATGCCTTACAGACATGTAACGTTGGAAAGTCTGTGAATCATTTACGTACTCACAAGAATTCTGAAATTCAAAAGAAAGCTAGGAGCTTAGTTGACACTTGGAAGAAACGTGTTGAGGCTGAAATGAATATTAGTGATTCAAAATCTGGATCTAGCCGGGGCGTTTCTTGGCCAGCTAAGCCTGCATCTTCTGAGGTGTCTCATGTTGGAAGTAGGAAAACAGGTGGATCTGCTGACGTAGCTGCAAAGAGCTCTTCAATGCTACCATCTGCATCCAAAAACTCTCAGGCTAAGATTAGCTCAGGAGAATCACTGCCCAAGCTTTCCCCATCTTCCTCTTCAACTAAAGCTACTACCACCTCAGTGGCCTGTAATTCAAAGGAGCAAAACTTTAAAGCTGGAGCTGGAACATCAGATTTACCCTTGACACCTATTAAGGAGGAAAGGAGCAGCAGCTCTAGTCAGTCTCAAAACAACAGCTTATCTTGTTCTAGCGAACAAGCAAAAACTATTGGTTCTTGTAGGGAAGATGCAAGGAGCTCCACTGCTGTGTCAATGAGTGCGGGCAAAATTCCTGGCAGTGCATCTCGGTCCCGGAAATCAAGCAATGGTCTGCATGGTTCTGTTTTAACTGCAGTTCAGAAGGAGCCCCATTCTGGAAAAAACTTGAGTAGAAACTCAACTTTAGAGAAGGTTTCACCGAATCAGCCTGCCCATGAAAAATCACCCGACGTGCTTCTTCCTGATCATGGAAGCAATCAGAGACTGATTGTTAGGTTGCCAAACACTGGCCGAAGTCCTGCCCGGGGAGCTGGTGGGGGCTGTGAAGATCCTGCAATTCTGCCTGGCAAAGCCTCACCTCCTGGAGATAAGCATGAGAATGTGGATAGAAGAGTGAAATCCAAAACTGATGGTTCTCAGATTAATAATATCTCTAATATGACCACTGATGTTTGCGATGCTAGTGAAGCTGTGGCTGATTGTGAGGAAGGTAATGACTCACCAACTGGTGAAGGATGCAGGGCCACTGAAGATGGTGATAAACTCACGGAAACATCAAAACCAACCAATTCATCTGGATTTCTTTCCAGATCAGGGCAGACTTATGATGCTTCCTTGAGCTCCATAAATGCATTAATTGAAAGTTGTGTGAAATTTTCTGAAGCAAATCCCTCTGTGTCCCCTGTTGATGATGCTGGGATGAACCTACTTGCTACTGTAGCTGCTGGAGAAATATCTAGGTCAGAAAATGTGACGCCAGCAGTTTCTCCTGGGAGGAAGTCTCCTGCAGCAGATGAATCATGCTCAGGCAACAATGATAGTAAGTTACAACATTCAGGCGAAGCAGTTGCTTGCACTCTTGAACATTTGAAGGGTGGTGGTACTGAGGATCATGTAAACACCGTTGATCCAGTGCAGCTCAAGAATGATGCAAAGCATACAGTAGGATCAAGATCATGTGATCTGTCCGGAGATGGTGAATCTACACAATCTGGTTGCAGAGAGAAAACTGTTGTTGGTACAGATTTGTCGCATAATGTGGAAGGTCCATTCTTAGGGCCTGACGCCAAGGAGGAAGCTTCTGAAACAGTGTTGCCTGCAAAAAAGGAGAATGTTGTGGAGCCTGAGGGGGTTAGTCCGCTTCATGAGCAGAGGAAATTGGAAACTCATTGGGGTAAGAGCAGCAATAATTCAGACTCTAAATTAAAAACAAGGACTTCTGTTGATGAGGACAGGAAGGTTGATCGTGTTAATGAGAGGAAGATGGAGAGTGAAGTTTCAGTTTGTGAAGGTCCTCATGTAAATCTAAAAATAGAGGAGGAAGTGTGTGAAAAATCACCTGAATCATCTACTGGTTTGGGTAATGAGAACCAGATTAGCGGAGAGAAAGTGGCTGGTAGTATCATCTCAGTGCACAAGCATGAGTTTATTGAAGGCAGAAATGAGAATGTTGTGGTACCACCTTCTGCTCCTAGTTATCCTTTGATGGAATCTAAGGCTGCGAGTACTGTTGACGTGAAACCATGTGAGGTGGAGAATAGTAAGGAAAGACAAAGGGATCTGGACTCATCTGGGCCTGCTGTCAACAACCAATGTACTGCAGAGAATTTGGATGGAAAAGAGGTTCTTAGTCTCAGCATTGATTCATCTGTACAGTCCGAGTCTCCAAAAAATTCTGTACAAGAGAATGAAGTGCTAAAAAAACCTTCTGGGTTTAATATGGACAGAGTTGTGTCTGATGGTGCAGCAGAACAACACGCCTCTGGTTCACATCATCTGGACTTTGATTTAAATGAGGGATTTCCTGTTGATGATGTGAATCAAGGGGATGTGAGGCAGGAAGAACCTATTACATCATCTGCAGTCCACGTCCCGTACCCATTGCCTTTTCCTGTTTCTTCCATGTCTGGGGGCTTCCATGCTTCGATTACTGTGGCTTCTGCTGCCAAAGGGCCTGTTATTCCACCAGAGAACCCATTGCGGAGTAGGGGGGAGCTTAGGTGGAAAGGGTCGGCTGCTACCAGTGCATTCCGACCAGCTGAGCCTAGGAAAAACACAGAGCAGCTATTAAATACTAGTGATAGTGCTACCAAGCAAGGTCGTGCTCCTCTAGATTTTGATTTGAATGTGCCTGATCAGAGAAGTTTTGACGATGCGGCTTCCCATGTCTCTTCAGAAACTTGCTTAGAATCCTTACCTCGTGACCGTGGGACTGCAGGACTTGATCTTGATTTAAACCGAGTTGATGAGACTCCTGATTCTGGATGTTTTTCTGTAAGCAAACTGGATATTCCTTCTTTACCAACTAAACCTTCATTATCTGGTGGATTATCCAGCGGTGGAAATGTATCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTGGCACTGAAGCCCCAGCACGAAGCCAGCAGATAAAAAGTACTGTTCCAATGCCTTCTACTGTTCATGGTGTAAGAACAAATAGTACTGATTTTGGGAATTATTCATCATGGTTTCCCTCAGGGACCTCCTATCCTGCAATCAATCTCCCACCACTTCTGCCTGGTAGAGAACAGAGCTTTGTTGCTGGTCCTGGAGCACAGCGAATGTTGGGTCCTCCAGGTAGCACTTCTTTTGGTCCTGAAATCTATAGAGGGGCAGTTCTTTCATCCTCTCCAGCTGTTGCTTATCCTTCCAGCACACCATTTCAGTACCCAGGATTTCCTTTTGAAACTAATTTTCCTTTGCCTTCAAATTCCTTTTCTGGCTGTTCAACACCCTTCATGGACTCCTCAACAGCAGGTGGCCTTTGCTTTCCTACCATGCCCTCACAGCTAGTTGGGCCTGGTGGTGTTGTCTCGTCCAATTTTCCCCGTCCTTATGTTATGAGTCTTCCGGGTGGTACAAGTAACGTGATACCTGAAAGTAGAAAATGGGGAGGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGGTTCAGATACAGAACGGAGAGATGATAGATTGCCTTCAGGGTTGAAGCAACCTCCTGTCTCAAGTTCCCAAGCCTTGATGGAGGAACAAATGAAGATGTTTCAGGTGGCAGGAGGTGTATTGAAGAGAAAGGAACCTGATGGAGGTTGTGAGCCCCCTTCTTTTGTTCATAATGTCAGAAATATTGAAGACGATACAAGCGTGAAGGCAGCCTCGAATGAGACTGCAGCTGTGCCTCGTCATTTCTAA 4818 0.45 MHVSGGEEWKQRRHMWPVPATATTVAPAADSSSSEFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLTLKKEESPSLEVNWLYRPADLKLAKGIQLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFICRRVYDIESERLWWLTDKDYINVRQEEVDQLLDKTRLEMHGAVQSGGRSPKPLNGPTSTPSLKSGSDSVQNSSSFGSQGKGKKRERGDQGSDSSKRERLIKTEDGDTGQHRPENMLKSEIAKITENGGLVDFEGVERLVQLMQPDSADRKIDLAGRIMLADVIAVTDRFDCLGSFVQLRGLRVLDEWLQEVHKGKIGDGNTPKESDKSVEELLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNISDSKSGSSRGVSWPAKPASSEVSHVGSRKTGGSADVAAKSSSMLPSASKNSQAKISSGESLPKLSPSSSSTKATTTSVACNSKEQNFKAGAGTSDLPLTPIKEERSSSSSQSQNNSLSCSSEQAKTIGSCREDARSSTAVSMSAGKIPGSASRSRKSSNGLHGSVLTAVQKEPHSGKNLSRNSTLEKVSPNQPAHEKSPDVLLPDHGSNQRLIVRLPNTGRSPARGAGGGCEDPAILPGKASPPGDKHENVDRRVKSKTDGSQINNISNMTTDVCDASEAVADCEEGNDSPTGEGCRATEDGDKLTETSKPTNSSGFLSRSGQTYDASLSSINALIESCVKFSEANPSVSPVDDAGMNLLATVAAGEISRSENVTPAVSPGRKSPAADESCSGNNDSKLQHSGEAVACTLEHLKGGGTEDHVNTVDPVQLKNDAKHTVGSRSCDLSGDGESTQSGCREKTVVGTDLSHNVEGPFLGPDAKEEASETVLPAKKENVVEPEGVSPLHEQRKLETHWGKSSNNSDSKLKTRTSVDEDRKVDRVNERKMESEVSVCEGPHVNLKIEEEVCEKSPESSTGLGNENQISGEKVAGSIISVHKHEFIEGRNENVVVPPSAPSYPLMESKAASTVDVKPCEVENSKERQRDLDSSGPAVNNQCTAENLDGKEVLSLSIDSSVQSESPKNSVQENEVLKKPSGFNMDRVVSDGAAEQHASGSHHLDFDLNEGFPVDDVNQGDVRQEEPITSSAVHVPYPLPFPVSSMSGGFHASITVASAAKGPVIPPENPLRSRGELRWKGSAATSAFRPAEPRKNTEQLLNTSDSATKQGRAPLDFDLNVPDQRSFDDAASHVSSETCLESLPRDRGTAGLDLDLNRVDETPDSGCFSVSKLDIPSLPTKPSLSGGLSSGGNVSRDFDLNNGPGLDEVGTEAPARSQQIKSTVPMPSTVHGVRTNSTDFGNYSSWFPSGTSYPAINLPPLLPGREQSFVAGPGAQRMLGPPGSTSFGPEIYRGAVLSSSPAVAYPSSTPFQYPGFPFETNFPLPSNSFSGCSTPFMDSSTAGGLCFPTMPSQLVGPGGVVSSNFPRPYVMSLPGGTSNVIPESRKWGGQSLDLNSGPGGSDTERRDDRLPSGLKQPPVSSSQALMEEQMKMFQVAGGVLKRKEPDGGCEPPSFVHNVRNIEDDTSVKAASNETAAVPRHF 1605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0551 1605 MobiDBLite consensus disorder prediction 1220 1234 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 910 927 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 1506 1522 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 411 680 - -
Alju01g0551 1605 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 420 IPR035441 -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 695 734 - -
Alju01g0551 1605 ProSiteProfiles TFIIS N-terminal domain profile. 323 409 IPR017923 -
Alju01g0551 1605 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1575 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 1506 1546 - -
Alju01g0551 1605 SMART TFS2_5 329 408 IPR003617 GO:0005634
Alju01g0551 1605 MobiDBLite consensus disorder prediction 856 872 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 844 961 - -
Alju01g0551 1605 ProSiteProfiles BAH domain profile. 42 157 IPR001025 GO:0003682
Alju01g0551 1605 SMART BAH_4 42 157 IPR001025 GO:0003682
Alju01g0551 1605 MobiDBLite consensus disorder prediction 181 255 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 657 671 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 783 811 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 938 961 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 446 501 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 1031 1067 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 220 255 - -
Alju01g0551 1605 Pfam TFIIS helical bundle-like domain 357 406 IPR017923 -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 512 603 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 412 426 - -
Alju01g0551 1605 CDD TFIIS_I 362 407 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 191 219 - -
Alju01g0551 1605 MobiDBLite consensus disorder prediction 1203 1282 - -
Alju01g0551 1605 Pfam BAH domain 43 151 IPR001025 GO:0003682
Alju01g0551 1605 MobiDBLite consensus disorder prediction 720 734 - -
Alju01g0551 1605 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 274 410 IPR035441 -
Alju01g0551 1605 Gene3D - 26 268 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0551 Alju-ChrAlju01 4123337 4129860 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Alju01g0551 BAH 1e-10 No_clan