Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0538 ATGGCGGGCGGAACTGAAGCTTTCCCTGATTTAGGAAGACACTGTCAACAAGACGATTGCTATCTCCTCGATTTCCTCCCTTTCACCTGCGCCGGTTGCCACCAGATATTCTGTCTCGAACATCGATCTTACAGGTCCCACAATTGCCCCAACTCCGATCATAACAGCCGGAAGGTCGTCATCTGCGAAATATGTTCCATGGCTATCGAGACCACGGGTCACGTCGGAGAAGAAGAGAAGGCTCTCTTAGAGAGGCACGAAAAGTCTGGAGATTGTGACCCAAAGAAGAAAAAAAAACCCACTTGTCCTGTTAAGAGATGCAAGGCGATCTTGACGTTCTCTAATACAAGCACGTGTAAAACGTGTGGCTTGAAGGTGTGCCTAAAGCACCGTTTTCCGGCTGACCACGCCTGTGACAGGGCTGCTGCGGCTAAAGCTGTTAAAAATCGATTGAATTTGGATTTGAATTATCCGCTTGCAACTGCTTTGTCACTGAGGAACGGAAAGGACTGCGCAAAGAGCCCTTCTTCTCGTCCTGCCGCTACTCAATCGGTCAAAGCCTGCTGA 567 0.4938 MAGGTEAFPDLGRHCQQDDCYLLDFLPFTCAGCHQIFCLEHRSYRSHNCPNSDHNSRKVVICEICSMAIETTGHVGEEEKALLERHEKSGDCDPKKKKKPTCPVKRCKAILTFSNTSTCKTCGLKVCLKHRFPADHACDRAAAAKAVKNRLNLDLNYPLATALSLRNGKDCAKSPSSRPAATQSVKAC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0538 188 Gene3D - 2 67 IPR035896 -
Alju01g0538 188 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 160 - -
Alju01g0538 188 SUPERFAMILY AN1-like Zinc finger 5 59 IPR035896 -
Alju01g0538 188 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Alju01g0538 188 Pfam AN1-like Zinc finger 102 141 IPR000058 GO:0008270
Alju01g0538 188 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Alju01g0538 188 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Alju01g0538 188 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Alju01g0538 188 MobiDBLite consensus disorder prediction 169 188 - -
Alju01g0538 188 SUPERFAMILY AN1-like Zinc finger 94 146 IPR035896 -
Alju01g0538 188 Gene3D - 78 154 IPR035896 -
Alju01g0538 188 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0538 Alju-ChrAlju01 4063036 4063602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0538 2 171 C2H2 Transcription Factor Family AT3G28210 65.882 5.95e-77 226