Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0520 ATGGTTGGCTGGCTGGCTGGTGCTCTCTCACGCTCGCTCGCTTTGCTTTGGTTTGTCTGGAGTGTGTTTGGTTCAATGAAGGCGTTATTAGCTGAAAATTCTCAGTTTTCTCACTCACCAGTCGCCACCGCTTCACACAATCACACCCCCCTCTTTACCTCTTTCCTTTTCGGCTCCCCTTTTGTAAAAATATTTCCTTCTCTATTTTGTATTCCTTCCCATATAAAAACGACATACGCAAGAACCTTGACAACGGATCTTCCGCAATCATTCATTCCTACCCCTCTCCGCGGCTCTTTGATTCTCTCTGCCTCCGGCTTAGTCTTGTCGGATCAGATACCAGGAGGGACTGAAAACGACGAGAACTGGGTCGACATCATGGTTGAAACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTATCTCTTCACCCCCTCCTTCCAACGCCAAACGATCTAAGGTGTCCGAGGATGCGTCGTCAACCAGTCTCCCATCGGCTGAAATTTTTGGCCAGGTCAACGAATCTGGGAATGAATCTCGAGAACCGGAGCTACGGCCGTCTGATCTGCCAGATGCCGATTCGGTGAAGGCTGTAGACCTGAGTGACGCGAGGTTACCTGATAAATCCCCTGCAGCGGCTGCCGAAGGCGAGGCTCTGGTGTCACCGAGGTCTTCAGATGAAACTGCGGTGGAAGCGGAGAAATCAAAGTCTGTTGGCGTGGTGGCGCATGGGCGGTCGAAGAAACGCCCTACGAAATCCACAAAATCGGGCGCCAAGGCTGCATGGGGAAAGCTTCTTTCTCAGTCCTCTCAGAATCCTCATCTGTCCATGTATGGGCTCTTCACTGTTGGTCAAGGACGTCAGTGTGATTTATGTCTCAAAGATCCTGCTGTTAGTAATGTTTTGTGCAAATTGAGGCACATAGAGCGTGGAGGTTCATCTGTTGCATTACTGGAAGTTTTAGGAGGTAAAGGTGTTGTCCAAGTCAATGGCAGGAACTACCATAAAAATTCCCGTGTGATCTTAAGTGGTGGCGATGAGGTGGTCTTTGGTTCTTCTGGCAAGCATGCTTATATTTTTCAACAGCTCACCAATAATAATATAACTACAACAGGGGTATCCCCTTCTGTTAGTATATTAGAAGCCCGGAGTGCACAGATTAAGGGAATGCGAATTGAAGGATCTGGGGACTCTTCGGCTGTTGCAGGAGCATCGATACTAGCGTCTTTATCTGACCTTCATAAAGATTTATCTCTTCTTCCACCTCCTGCCAAAACTGGTGAGAATGCCACCCAGAATGCTGAGGTTTTGTCTGTAACTTCTGGCCATAGGGATGACAGCGGGGACAATGAATTGAAGGATGCCACCAAAAATGATGATTCAACTGAAGGTATTTTATCTGAGAAAACTGTTCTTCCATCCTCTGCTGCTGCCAATGAAAACCCTAGTCTTGACTGCAAGCGGGTAGATGCTGGTGTGGATGCAGATGTTGGGAAAGTAAATGGGGCTGCCTATGAATTAAGGCCACTGTTGCGCATGCTTGCTGGTTCTAGTACCGAATTTGATTTGGGTGGTAGCATTTCCAAAATATTGGAAGAGCGGAGGGATTTAAGAGAACTCCTTAAGGATTTTGACCCTCCTACAATCTTGGCATCAACAAGGCGGCAAGCATTTAAGGAGAGTTTACAACAAGGAATTTTAAATCCTGATGATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGTGATACAACAAAGAATGTTTTGATTGCTTCAACATACATTCATTTGAAGTGCAATGGTTTTGCAAAGTATGCTTCAGATCTCCCTTCAGTGTGCCCAAGAATATTGTTATCTGGTCCTGCAGGTTCTGAGATATATCAGGAAACTTTATCAAAGGCTCTCGCAAAGCATTTTGGTGCCAGGCTACTTATTGTAGATTCTCTTTCATTGCCTGGTGGGACGCTACCAAAGGACTCTGATTCTGCTAAAGAAAGTTCTAGGCCTGAGAGAGCATCTATGTTTACAAAGCGAAGTGCACAGGCTGCTACATTACAGCATAAGAAGCCAGCTTCTAGTGTTGATGCTGAGATTGTAGGAGGATCAACATTAAGTTCTCAGGCCATGCTGAAGCAAGAGGTATCTACTGCGTCATCTAAGGGCTCTACCATAAAAACAGGTGACAGAGTTAAATTCGTTGGTAATGTTCCTTCAGCCAGTATTTCGCTAACAAATTATCCTTCCAGGGGACCGAGCTATGGCTCCCGTGGAAAAGTTCTTCTTGCTTTTGAAGAAAATGGGTCATCAAAAATTGGAGTCAGGTTTGATAAGTCAATTCCAGATGGGAATGATCTTGGAGGCCTTTGTGAAGATGATCGGGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGTTCTGGAGTGGATGACAATGACAAGCTTGCAATAAATGAAATTTTTGAGGTTGCCTCCAACCAAAGCAGAAGTGGTTCGCTAGTGTTGTTCATGAAAGATATAGAGAAAGCAATGGTTGGAAACACTGATGTTTTGAAGAGTAAATTGGAAAGTTTGCATCCAAATGTTGTTGTGATTGGCTCGCATACCCAGCCAGACAATCGCAAGGAGAAGACTCACCCAGGTGGCCTTCTGTTTACGAAGTTTGGGAGCAATCAGACTGCACTGCTTGACCTTGCATTTCCGGATAATTTTAGCAGACTTCATGATAGGAGCAAAGAAACCCCAAAAACAATGAAGCAACTTAGCCGCCTTTTCCCCAACAAAGTGACAATACAGCTTCCTCAGGATGAGACTTTGCTTTCTGATTGGAAACAGCAGTTGGAACGAGATGTTGAAACTATGAAGGCGCAGTCAAATGTTGCCAGCATTCGTACGGTTCTCAACAGGTTTGGATTGGATTGCCCTGATCTTGAGACTCTCTGCATTAAAGATCAAGCCCTAACAACTGAAAGTGTGGAAAAAGTCATCGGCTGGGCTTTAAGTCATCATTTTATGCATCAATCGGAAGGTTCAATCAAAGACTCCAAGCTTGTGATATCTACTGAGAGCATTAAGTATGGGTTGAACATTCTACAGGGCATTCTAAGTGAAAGCAAGAACTTAAAGAAATCACTCAAGGATGTGGTTACTGAAAATGAATTTGAGAAAAAGCTTCTTGCCGATGTTATTCCGCCCAGTGATATTGGGGTCACCTTTGATGATATTGGAGCGTTGGAAAATGTAAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTCTGCAAGGGCCAGTTGACTAAGCCTTGCAAGGGAATATTGCTCTTTGGGCCCCCTGGTACTGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATCTCGATGTCGAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCAGTCTTTTCTCTGGCAAGCAAAATTGCACCAAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGACGTGAGAATCCTGGTGAGCATGAAGCTATGCGTAAGATGAAGAATGAGTTTATGGTGAACTGGGATGGTTTGCGTACAAAGGATAAAGAGCGTATACTTGTTCTTGCTGCAACAAATAGGCCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCCCGAAGATTGATGGTTAATTTGCCAGATGCTCCGAACAGAGAGAAAATTCTTGGAGTCATCTTAGCAAAAGAAGATTTGGCGCCTGATGTTGAGTTGGAAGCAATTGCAAATATGACTGACGGATATTCAGGAAGTGACTTAAAGAATCTGTGTGTTACAGCAGCTCACTGTCCAATTAGAGAAATCTTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCGTTATCTGAGAACAGACCCTTGCCTGCATTATGTAACGGTGCCGATATTCGACCCTTAAAGATGGAAGATTTCAAGTATGCACATGAGCAGGTGTGTGCGAGTGTGTCATCGGAGTCAACAAATATGAATGAACTACTCCAATGGAATGACCTTTACGGAGAAGGCGGATCCAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 4137 0.4438 MVGWLAGALSRSLALLWFVWSVFGSMKALLAENSQFSHSPVATASHNHTPLFTSFLFGSPFVKIFPSLFCIPSHIKTTYARTLTTDLPQSFIPTPLRGSLILSASGLVLSDQIPGGTENDENWVDIMVETRRSSSSAKRSISSPPPSNAKRSKVSEDASSTSLPSAEIFGQVNESGNESREPELRPSDLPDADSVKAVDLSDARLPDKSPAAAAEGEALVSPRSSDETAVEAEKSKSVGVVAHGRSKKRPTKSTKSGAKAAWGKLLSQSSQNPHLSMYGLFTVGQGRQCDLCLKDPAVSNVLCKLRHIERGGSSVALLEVLGGKGVVQVNGRNYHKNSRVILSGGDEVVFGSSGKHAYIFQQLTNNNITTTGVSPSVSILEARSAQIKGMRIEGSGDSSAVAGASILASLSDLHKDLSLLPPPAKTGENATQNAEVLSVTSGHRDDSGDNELKDATKNDDSTEGILSEKTVLPSSAAANENPSLDCKRVDAGVDADVGKVNGAAYELRPLLRMLAGSSTEFDLGGSISKILEERRDLRELLKDFDPPTILASTRRQAFKESLQQGILNPDDIDVSFESFPYFLSDTTKNVLIASTYIHLKCNGFAKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDSLSLPGGTLPKDSDSAKESSRPERASMFTKRSAQAATLQHKKPASSVDAEIVGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNVPSASISLTNYPSRGPSYGSRGKVLLAFEENGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGVDDNDKLAINEIFEVASNQSRSGSLVLFMKDIEKAMVGNTDVLKSKLESLHPNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDETLLSDWKQQLERDVETMKAQSNVASIRTVLNRFGLDCPDLETLCIKDQALTTESVEKVIGWALSHHFMHQSEGSIKDSKLVISTESIKYGLNILQGILSESKNLKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILGVILAKEDLAPDVELEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALSENRPLPALCNGADIRPLKMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0520 1378 Pfam FHA domain 282 351 IPR000253 GO:0005515
Alju01g0520 1378 MobiDBLite consensus disorder prediction 658 678 - -
Alju01g0520 1378 Gene3D - 1072 1352 IPR027417 -
Alju01g0520 1378 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 1072 1247 - -
Alju01g0520 1378 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 556 1377 - -
Alju01g0520 1378 Gene3D - 1246 1340 - -
Alju01g0520 1378 SMART AAA_5 1110 1247 IPR003593 GO:0016887
Alju01g0520 1378 Coils Coil 947 967 - -
Alju01g0520 1378 MobiDBLite consensus disorder prediction 134 259 - -
Alju01g0520 1378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1073 1352 IPR027417 -
Alju01g0520 1378 MobiDBLite consensus disorder prediction 178 203 - -
Alju01g0520 1378 CDD RecA-like_ATAD1 1077 1243 - -
Alju01g0520 1378 Pfam AAA+ lid domain 1267 1303 IPR041569 -
Alju01g0520 1378 SUPERFAMILY SMAD/FHA domain 263 356 IPR008984 GO:0005515
Alju01g0520 1378 MobiDBLite consensus disorder prediction 442 464 - -
Alju01g0520 1378 Pfam ATPase family associated with various cellular activities (AAA) 1114 1243 IPR003959 GO:0005524|GO:0016887
Alju01g0520 1378 MobiDBLite consensus disorder prediction 134 177 - -
Alju01g0520 1378 Gene3D - 245 369 - -
Alju01g0520 1378 MobiDBLite consensus disorder prediction 438 464 - -
Alju01g0520 1378 ProSitePatterns AAA-protein family signature. 1217 1236 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0520 Alju-ChrAlju01 3894370 3905645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0520 1109 1314 Calmodulin-binding Proteins AT3G56690 36.190 1.42e-31 132