Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0488 ATGTCGGGGGCGCCGCCATCGTCAAAGGTTTTGAAGCAAACCTCTATTTCGCTTGATAAATTTGTGCAATGCTCAGATCTTCCTCCGGCTATTAGGTGTCCCAGGCAGCCACTGGAGTTGATGGAGAAGACAGGCGTAATATTCATGGAGACGAGAGATGATGAGAACACCGCGGGCCGCAGCAGAGACAGAACCAGTACATTAACCATGGGAATCGATTTGAAAGCAGGAGGTAAGAGCAAAAAGACAAAGCGAACCGCTCCCAAATCTGACGATATTTACTTGAAACTCCTTGTCAAGCTTTACCGGTTTCTTGTGAGGAGGACCGAGAGTAACTTCAATGCGGTGATTCTGAAGCGGCTTTTCATGAGCAAAGTCAACAAGCCACCTCTATCTCTCTCTCGGCTGATTTGTTTCATGAAGGGAAAGGAAGACAAGATCGCCGTAGTTGTTGGGGTTGTGACCGACGACATTCGTGTGTATGAAGTCCCGGCGTTGAAGGTGACTGCACTGAGGTTCACTGAAACTGCTAGAGCTAGAATTGAGAAGGCTGGCGGAGAGTGCCTGACATTTGATCAGCTGGCTCTTAGAGCTCCTCTAGGCCAGAACACGGTTCTCCTCAGAGGTCCTAAGAATGCCCGTGAAGCTGTCAAGCACTTTGGGCCGGCTCCAGGTGTGCCCCATAGCCACACGAAACCCTATGTCCGTTCAAAAGGAAGGAAATTTGAGCGGGCCAGAGGAAGAAGAAACAGTAAGGGTTTCAGAGTTTAA 771 0.4942 MSGAPPSSKVLKQTSISLDKFVQCSDLPPAIRCPRQPLELMEKTGVIFMETRDDENTAGRSRDRTSTLTMGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTESNFNAVILKRLFMSKVNKPPLSLSRLICFMKGKEDKIAVVVGVVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0488 256 Gene3D - 70 256 - -
Alju01g0488 256 FunFam 60S ribosomal protein L18 70 256 - -
Alju01g0488 256 PANTHER 60S RIBOSOMAL PROTEIN L18 70 256 IPR000039 GO:0003735|GO:0005840|GO:0006412
Alju01g0488 256 Pfam Ribosomal protein 60S L18 and 50S L18e 71 256 IPR021131 -
Alju01g0488 256 SUPERFAMILY Ribosomal proteins L15p and L18e 89 208 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0488 Alju-ChrAlju01 3651203 3663920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0488 72 256 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.570 8.56e-104 297