Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0487 ATGGATATGGGTACGGGCACTCACAGTAATAAGTATGCCCATAATGGTAAGGTCCTGCTTGGCTCTGCCACTCTTCTCTTCTTCATGTGTATCCTCCTCATCTTCCTTCACACCTACTCTTGCTCCGGCTTCCGCCGCCGCCGCCCCAATCGGCATCCCTTCCCGACTCCCGTCGCTGACCCTCACACGGCGCTTGACCCTTCTCTTTTCAAGTTCCTCCCCACCTTCACCTACTCCTCCGCCACTCACCTCCACCTCCAGGAATGTGCCGTCTGCTTGTCAGAGTTCGAAGAAGACGAGGACGGTCGCGTCCTCCCAAACTGCAGTCACTATTTCCATACTCATTGCATCGATACATGGTTCCGCTCTCACTCCAACTGCCCAATATGCCGAGCTCTGGTAGAACCGCCAAAAATCTCGCCGAAAAAAACAGAGGCGGCTGTTACCGATGGAGAGTTCGCGGGTTGCTCGTATCTTCCTCCGCCGATTTCGTGCCCGAGGAAGGAATTCGATTTAGATATGCTGAGAGTGGTAGTGGAGGCCGGTAAGGAAGAAACGAGCGAGAATTTGATGAGTTCGGAGCCGGGTCCACCCGGAGATGCCCGATTGAAAAGTTCCGACACGGCTTATGGAAGGGTATTTGGACGGAGCGGTAAGGCGGTGACCATGTAG 672 0.5446 MDMGTGTHSNKYAHNGKVLLGSATLLFFMCILLIFLHTYSCSGFRRRRPNRHPFPTPVADPHTALDPSLFKFLPTFTYSSATHLHLQECAVCLSEFEEDEDGRVLPNCSHYFHTHCIDTWFRSHSNCPICRALVEPPKISPKKTEAAVTDGEFAGCSYLPPPISCPRKEFDLDMLRVVVEAGKEETSENLMSSEPGPPGDARLKSSDTAYGRVFGRSGKAVTM 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0487 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 137 IPR013083 -
Alju01g0487 223 SUPERFAMILY RING/U-box 73 137 - -
Alju01g0487 223 CDD RING-H2_EL5-like 88 131 - -
Alju01g0487 223 Pfam Ring finger domain 88 131 IPR001841 -
Alju01g0487 223 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 134 IPR044675 -
Alju01g0487 223 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
Alju01g0487 223 SMART ring_2 89 130 IPR001841 -
Alju01g0487 223 MobiDBLite consensus disorder prediction 184 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0487 Alju-ChrAlju01 3647633 3648304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0487 9 135 Rapid Response to Elicitors AT3G16720 50.345 1.03e-37 131