Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0486 ATGAGAAGCATGTCAAAGCTGTCATTGGCATTAATGGCCGCCGTGTGCGTCCTGATTCTGACACCACACCAAATTTATGGAGAAGAAGACGAATTGAGAGGGGAAGCGCTACTAAACAAGGTATGCGAGAAAACGCCATCGAAGGATGTGTGCGTAGAAACCCTAAAAAGGGACCCCAGAAGTGAAACGGCAGGGATAAAAGAGGTGGCGTTGATGTCGGTGCAGGCGGCGAAGGATAATGCTTCTGATATCATAAGCCACCTGAAGGCGCTGGTGGTGGACGACAGTTTGGAGCCGGAAGTCCAACAGGGCATTTCCGATTGCTTGGATGTATTGGGAGACGCACAAGATCAGCTTGACACGGCGGCGGCGGCCATGCTGGCGAAGGTCGGAGAGGACACTGAGAAATGGCTGCAGGCGGCGGTGGACGCCGTGTCTACCTGCGAGGGTTTCCTGAACGGAGAAGATCAGATCCTCCTCAATAAAGAGGACAACTTCCGTCTCTTGTGCAACATTTCCTTGTCCATTTGCGAGGCTTTGGACAATAAAGAGGTCTAG 558 0.5215 MRSMSKLSLALMAAVCVLILTPHQIYGEEDELRGEALLNKVCEKTPSKDVCVETLKRDPRSETAGIKEVALMSVQAAKDNASDIISHLKALVVDDSLEPEVQQGISDCLDVLGDAQDQLDTAAAAMLAKVGEDTEKWLQAAVDAVSTCEGFLNGEDQILLNKEDNFRLLCNISLSICEALDNKEV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0486 185 SMART PMEI_2 33 176 IPR006501 GO:0004857
Alju01g0486 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 180 IPR035513 -
Alju01g0486 185 NCBIfam pectinesterase inhibitor domain 6 178 IPR006501 GO:0004857
Alju01g0486 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 180 IPR035513 -
Alju01g0486 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 176 - -
Alju01g0486 185 Pfam Plant invertase/pectin methylesterase inhibitor 37 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0486 Alju-ChrAlju01 3643845 3644402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0486 38 157 Carbohydrate Esterase AT5G53370 26.400 3.22e-07 47.8