Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0485 ATGGCTTCCAAGCAGCTATGTACCCTCTCAACAACAATGGCGCTTCTTCTTCTCCTTGCCTTATTCACCACCTTAGCATTTGCAGACACTTCACCTTCAACTCCGATCAGCCCAGGAACTGCATGTAGTTCCACACCTGACCCTTCTTATTGCAACTCCGTTCTCCCACCCAACCAGAAAGGCAATGTCTACGACTATGGCCGTCTCTCCGTTAGCAAATCCCTATCGCAGGCTCGTAAATTCTTGACCCTCGTCGACAAGTATCTCCAGCGACGATCTACTTTATCCGCCGCAGCCATTCGTGCCCTCGAAGATTGCCGGACCCTGGGCGAGCTCAACTGCGATTTCCTCTTAAATTCATTCCAAACTTTGAACAAGACCACTAGGTTTCTTCCCAGTTTACAAGCTGACGATATCCAAACCCTTCTCAGTGCTATCTTAACTAACCAACAGACCTGTTTGGATGGCCTTAAAGACACCGCTTCGGCTTGGATCGTTAAGAACGGACTCTCGGTACCTCTTTCTAATGATACCAAGCTGTACAGTGTGTCTCTGGCTATGTTCACAAAAGGTTGGGTTCCTAATGCCAAGAAGAAAACGACGGCGATTCAGCCAACCAAGAAACAGCTTGCCTTTGGAAATGGGCGATTGCCGCTTAAAATGTCAAGCAGGAACCTTGCCATCTACCGGTCAGTGAGTCAGAGGAAAATGCTTCAGACAGCCACCGTGGGCGGTGACGTGGTGTTGGTGAAAGACATCGTGACGGTGAGACAGGACGGGACTGGAAACTTCACCACCATCAATGACGCCATTGCTGCCGCTCCAAACAAGTCTTCCTCTGCCGACGGCTACTTCCTTATCTACGTCAGCGCTGGTGTTTATGAAGAATACGTCAACATTGATAAGAAGAAGACTTACTTGATGATGATGGGAGACGGTATCAACAAGACAATCATCACCGGCAACCGAAGTGTCGTTGACGGCTGGACCACCTTCAACTCCGCAACTTTTGCTGTATCAGGGCAAGGATTCGTGGGGGTGAACATGACGATTCGTAACACGGCGGGGCCAGAAAAGCACCAGGCCGTTGCACTTCGAAACGGAGCAGATTTATCGACGTTTTACAGTTGCAGCTTTGAGGGGTACCAGGACACATTATATGCGCATTCTCTGAGACAGTTCTACAGAGAATGTGATATATACGGCACCGTAGATTTCATATTCGGAAACGCCGCCATGGTCCTCCAAAACAGCAATCTGTATCCTCGTTTACCCATGAGCGGGCAATTCAACGCCGTCACGGCACAGGGGCGAACCGACCCGAATCAAAACACGGGCATTTCGATCCATAACTGCAGCATCAGAGCAACAGACGATTTGGCGGCCACCAATGGTTCTGTGAGCACGTATCTTGGAAGGCCATGGAAGGAGTATTCGAGAACGGTTTATATGGAGAGCTTCATGGATAGCGTCATAGCGAGTGCGGGTTGGCAGAAATGGGACGGTGATTTTGCGTTAAGCACTCTGTATTATGCAGAGTTCAAGAACAGTGGGCCTGGGTCTAGCACCGCCGACAGAGTGACATGGCCTGGCTACCATGTCATCAACGCCACCGACGCCGCTAATTTCACGGTGGCCAACTTCTTGCTCGGAGATGACTGGTTGCCTCGCACTGGAGTCACTTATACCAGCAACTTGATATAG 1704 0.5 MASKQLCTLSTTMALLLLLALFTTLAFADTSPSTPISPGTACSSTPDPSYCNSVLPPNQKGNVYDYGRLSVSKSLSQARKFLTLVDKYLQRRSTLSAAAIRALEDCRTLGELNCDFLLNSFQTLNKTTRFLPSLQADDIQTLLSAILTNQQTCLDGLKDTASAWIVKNGLSVPLSNDTKLYSVSLAMFTKGWVPNAKKKTTAIQPTKKQLAFGNGRLPLKMSSRNLAIYRSVSQRKMLQTATVGGDVVLVKDIVTVRQDGTGNFTTINDAIAAAPNKSSSADGYFLIYVSAGVYEEYVNIDKKKTYLMMMGDGINKTIITGNRSVVDGWTTFNSATFAVSGQGFVGVNMTIRNTAGPEKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAMVLQNSNLYPRLPMSGQFNAVTAQGRTDPNQNTGISIHNCSIRATDDLAATNGSVSTYLGRPWKEYSRTVYMESFMDSVIASAGWQKWDGDFALSTLYYAEFKNSGPGSSTADRVTWPGYHVINATDAANFTVANFLLGDDWLPRTGVTYTSNLI 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0485 567 FunFam Pectinesterase 248 566 - -
Alju01g0485 567 NCBIfam pectinesterase inhibitor domain 10 188 IPR006501 GO:0004857
Alju01g0485 567 PANTHER PECTINESTERASE 22 556 - -
Alju01g0485 567 SMART PMEI_2 33 187 IPR006501 GO:0004857
Alju01g0485 567 Pfam Plant invertase/pectin methylesterase inhibitor 40 187 IPR006501 GO:0004857
Alju01g0485 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 190 IPR035513 -
Alju01g0485 567 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Alju01g0485 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 190 IPR035513 -
Alju01g0485 567 Gene3D - 248 566 IPR012334 -
Alju01g0485 567 Pfam Pectinesterase 254 552 IPR000070 GO:0030599|GO:0042545
Alju01g0485 567 FunFam Pectinesterase 39 190 - -
Alju01g0485 567 CDD PMEI-like_3 40 192 - -
Alju01g0485 567 SUPERFAMILY Pectin lyase-like 250 564 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0485 Alju-ChrAlju01 3640655 3642445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0485 9 567 Carbohydrate Esterase AT4G02330 61.324 0.0 721