Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0484 ATGGCTTTCAAGCTCTTGCCCCTTCTTTCTCTATCATCCTTTTATTTTCACCTAATATTCTTAACCTCCTTTGTATCATCATCAATAGCAGTACCCCATCAGAATCAGAATAAGCATGGAAAAGGTCACGCTGCTCCTCCAACAACCACCTGCGACTCCAAAAAAAACCCTTCTCACTGCAAACATGTTCCTCCTGGTCATCACTACGGCAACAACATATATGACGATGGCCGTAACTCTGTTAAAAAATCCCTAGCTCACTCCCACAAGTTTCTCAACTTAGTCGACTCCTACCTTCAATCTCCTTCCTATTATTCTCAGTCCACTGTTCGAGCTCTTCAAGATTGTCAACTCCTCTCTGAATTGAACTATGAATACTTCTCAACCTGCTATTCCACTGTCAACCAATCCAGCTCTGTTCTTCCCTATTCACAAGCCGAATATATACAAACCATGCTCAGCGCCATCCTCACTAACCAACTCACTTGTTTGGATGGCCTTCAGACTACGGCTTCAGATCCAAAAGTCAAGGACGATCTCTCCGTTCCTCTCTTGAACGACACTGATCTTCACACTGTCTCTCTTGCTCTGTTCGTGAAGGGTTGGGTCCCTCAAAAGAAAAACAAACCATCATCTTCGCACAAAGGCGGAAAAAATTTAGGTTTCCATAATGGACGTGTGCCTATGAAGATGTCAAAGCCAGCACGAAACATATATGAGCATGCCAGAAGACACGGAAGAAAATTGCTTCAAACTCTGACTGACATAACAAGCGTCGTCATAAGCGACATCGCGGTTGTTAGTCAGGACGGAAGCGGAAACTTCACCACCATCAACGACGCCATAGTGGCCGCCCCCAGCAAAACCGCTGCCAATGGTGGCTATTTCTTGATTTTTATCACGGAGGGTGTGTATGAAGAATACGTCAACATAGATAAAAACAAAAGGAACCTGATGCTTCTGGGAGACGGAATCAATCGCACGGTGATCACCAGCAATCGCAGTGTTGCCGATGGGTGGACAACTTTCAATTCAGCAACATTCGCTGTGGTAGGACAAGCATTCGTAGCAGTGAACATAACAGTGAGGAACACGGCAGGGCCAAGCAAAAGGCAAGCAGTGGCATTAAGAAATGGAGCAGATATGTCTGTTTTCTACAGCTGCAGCTTCGAGGGATACCAGGACACTCTGTATACACATTCTATGAGGCAGTTTTACAGAGAATGTGACATATATGGAACGGTCGACTTCATATTCGGTAACGCTGCTGTTGTATTACAAAACTGCAACATATATCCACGCTTGCCCATGAGTGGACAGTTCAACGCTATCACAGCACAAGGTCGAACTGACCCGAACCAGAACACAGGCATTTCCATACAAAACGCCACTATAAATGCTGCTGACGATCTCATGAGTGCTCTCCAGAATGGTACGGTGGTGAAGACTTACCTGGGGAGGCCATGGAAGCAGTACTCGAGGACGGTTTACCTGCAGAGTTTCATGGACAGTTTGATAGATGCTTCGGGTTGGCGGGAATGGGATGGAGATTTTGCTTTGGATACGTTGTACTATGCAGAATATGAAAACAGGGGGCCGGGTTCTGGTACTGGGAACAGAGTAACGTGGCCTGGTTTCCATTTGATTAATGCTACGGATGCCGATAATTTCACTGCCGCTAGTTTCGTGCAAGGCGATGTTTGGCTGCTTCGCACCGGCGTCCCCTTCCTCACTGGTTTGATTTAG 1746 0.4616 MAFKLLPLLSLSSFYFHLIFLTSFVSSSIAVPHQNQNKHGKGHAAPPTTTCDSKKNPSHCKHVPPGHHYGNNIYDDGRNSVKKSLAHSHKFLNLVDSYLQSPSYYSQSTVRALQDCQLLSELNYEYFSTCYSTVNQSSSVLPYSQAEYIQTMLSAILTNQLTCLDGLQTTASDPKVKDDLSVPLLNDTDLHTVSLALFVKGWVPQKKNKPSSSHKGGKNLGFHNGRVPMKMSKPARNIYEHARRHGRKLLQTLTDITSVVISDIAVVSQDGSGNFTTINDAIVAAPSKTAANGGYFLIFITEGVYEEYVNIDKNKRNLMLLGDGINRTVITSNRSVADGWTTFNSATFAVVGQAFVAVNITVRNTAGPSKRQAVALRNGADMSVFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATINAADDLMSALQNGTVVKTYLGRPWKQYSRTVYLQSFMDSLIDASGWREWDGDFALDTLYYAEYENRGPGSGTGNRVTWPGFHLINATDADNFTAASFVQGDVWLLRTGVPFLTGLI 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0484 581 Pfam Pectinesterase 265 566 IPR000070 GO:0030599|GO:0042545
Alju01g0484 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 200 IPR035513 -
Alju01g0484 581 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Alju01g0484 581 CDD PMEI-like_3 49 198 - -
Alju01g0484 581 MobiDBLite consensus disorder prediction 205 226 - -
Alju01g0484 581 Pfam Plant invertase/pectin methylesterase inhibitor 49 184 IPR006501 GO:0004857
Alju01g0484 581 SUPERFAMILY Pectin lyase-like 260 579 IPR011050 -
Alju01g0484 581 MobiDBLite consensus disorder prediction 35 57 - -
Alju01g0484 581 PANTHER PECTINESTERASE 31 569 - -
Alju01g0484 581 Gene3D - 259 580 IPR012334 -
Alju01g0484 581 SMART PMEI_2 42 197 IPR006501 GO:0004857
Alju01g0484 581 FunFam Pectinesterase 258 580 - -
Alju01g0484 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 198 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0484 Alju-ChrAlju01 3628638 3630463 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0484 8 581 Carbohydrate Esterase AT4G02330 55.008 0.0 647